9r0t
De novo designed homodimeric NTF2-like protein with a hydrophobic pocket
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9r0t |
| deposition_date | 2025-04-24 |
| last_revision | 2025-10-22 |
| title | De novo designed homodimeric NTF2-like protein with a hydrophobic pocket |
| keywords | NTF2, DE NOVO PROTEIN; DE NOVO PROTEIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 27.20 Å |
| rg_electron | 26.00 Å |
| i0 | 33226400.00 |
| molecular_weight | 46450.0 kDa |
| excluded_volume | 59176 ų |
| envelope_volume | 75252 ų |
| shell_volume | 24378 ų |
| envelope_diameter | 85.3 Å |
| shell_rg | 32.91 Å |
| envelope_rg | 25.59 Å |
| shape_rg | 25.93 Å |
| total_rg | 27.05 Å |
| total_atoms | 3234 |
| n_residues | 411 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 84.3 Å |
| rg_real | 27.21 Å |
| rg_real_error | 0.61 Å |
| i0_real | 3.3230e+07 |
| i0_real_error | 4.1830e+05 |
| rg_reciprocal | 27.21 Å |
| i0_reciprocal | 33230000.0000 |
| total_estimate | 0.8975 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 23.3 Å |
| skewness | 0.254 |
| kurtosis | -0.699 |
| angular_range | — – 0.2900 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 15040000.0000 |
| n_real_points | 59 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.921; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.974; Smooth: 0.927 |