9r1k
X-ray crystal structure of a de novo designed Arcyriaflavin A binder, sc-apCC-4-A7F-1
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9r1k |
| deposition_date | 2025-04-27 |
| last_revision | 2026-05-06 |
| title | X-ray crystal structure of a de novo designed Arcyriaflavin A binder, sc-apCC-4-A7F-1 |
| keywords | de novo, coiled-coil, DE NOVO PROTEIN; DE NOVO PROTEIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 16.24 Å |
| rg_electron | 15.43 Å |
| i0 | 2768160.00 |
| molecular_weight | 12174.0 kDa |
| excluded_volume | 15517 ų |
| envelope_volume | 18035 ų |
| shell_volume | 10759 ų |
| envelope_diameter | 54.6 Å |
| shell_rg | 19.98 Å |
| envelope_rg | 15.66 Å |
| shape_rg | 15.46 Å |
| total_rg | 16.36 Å |
| total_atoms | 863 |
| n_residues | 125 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 56.3 Å |
| rg_real | 16.35 Å |
| rg_real_error | 0.41 Å |
| i0_real | 2.7680e+06 |
| i0_real_error | 3.3800e+04 |
| rg_reciprocal | 16.34 Å |
| i0_reciprocal | 2768000.0000 |
| total_estimate | 0.7201 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 3 |
| r_peak_primary | 15.9 Å |
| skewness | 0.527 |
| kurtosis | -0.163 |
| angular_range | — – 0.4900 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1607000.0000 |
| n_real_points | 79 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.479; Stabil: 0.998; Sysdev: 1.000; Positv: 1.000; Valcen: 0.928; Smooth: 0.000 |