9r7e
Cryo-EM Structure of catalytic amyloids
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9r7e |
| deposition_date | 2025-05-14 |
| last_revision | 2025-06-11 |
| title | Cryo-EM Structure of catalytic amyloids |
| keywords | Allosteric amyloid coiled-coil fibrils, PROTEIN FIBRIL; PROTEIN FIBRIL |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 25.52 Å |
| rg_electron | 25.29 Å |
| i0 | 8126570.00 |
| molecular_weight | 29710.0 kDa |
| excluded_volume | 40432 ų |
| envelope_volume | 44730 ų |
| shell_volume | 14920 ų |
| envelope_diameter | 79.2 Å |
| shell_rg | 31.91 Å |
| envelope_rg | 24.43 Å |
| shape_rg | 25.25 Å |
| total_rg | 26.47 Å |
| total_atoms | 2128 |
| n_residues | 208 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 77.9 Å |
| rg_real | 25.56 Å |
| rg_real_error | 0.60 Å |
| i0_real | 8.1270e+06 |
| i0_real_error | 1.1170e+05 |
| rg_reciprocal | 25.55 Å |
| i0_reciprocal | 8127000.0000 |
| total_estimate | 0.6140 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 17.6 Å |
| skewness | 0.112 |
| kurtosis | -0.975 |
| angular_range | — – 0.3100 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1275000.0000 |
| n_real_points | 63 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.770; Stabil: 0.999; Sysdev: 0.315; Positv: 1.000; Valcen: 0.725; Smooth: 0.000 |