9r7q
;Paranemic crossover triangle (PXT) with 2'-Fluoro-modified pyrimidines (FY RNA) ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9r7q |
| deposition_date | 2025-05-15 |
| title | ;Paranemic crossover triangle (PXT) with 2'-Fluoro-modified pyrimidines (FY RNA) ; |
| keywords | ;origami, modified nucleic acids, XNA, RNA, crossover, tetra-loop, 2'fluoro ;; RNA |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 37.46 Å |
| rg_electron | 37.37 Å |
| i0 | 271279000.00 |
| molecular_weight | 76928.0 kDa |
| excluded_volume | 71563 ų |
| envelope_volume | 133360 ų |
| shell_volume | 32435 ų |
| envelope_diameter | 119.9 Å |
| shell_rg | 39.49 Å |
| envelope_rg | 36.44 Å |
| shape_rg | 37.30 Å |
| total_rg | 37.56 Å |
| total_atoms | 5050 |
| n_residues | 113 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 118.0 Å |
| rg_real | 37.41 Å |
| rg_real_error | 0.92 Å |
| i0_real | 2.7130e+08 |
| i0_real_error | 4.3660e+06 |
| rg_reciprocal | 37.44 Å |
| i0_reciprocal | 271300000.0000 |
| total_estimate | 0.8946 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 44.9 Å |
| skewness | 0.164 |
| kurtosis | -0.612 |
| angular_range | — – 0.2100 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 4553000.0000 |
| n_real_points | 43 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.971; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.997; Smooth: 0.715 |