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9r82

;6-Helix Bundle - with a Clasp (6HB-C)-monomer with 2'-Fluoro-modified pyrimidines (FY RNA) ;

Method: ELECTRON MICROSCOPY Dmax: 187.8 Å Quality: GOOD

SAXS Profile

SAXS profile for 9r82

P(r) Distribution

P(r) distribution for 9r82
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1. Structure Basics

entry_id9r82
deposition_date2025-05-15
title;6-Helix Bundle - with a Clasp (6HB-C)-monomer with 2'-Fluoro-modified pyrimidines (FY RNA) ;
keywords;origami, modified nucleic acids, XNA, RNA, crossover, tetra-loop, kissing-loop, 2'fluoro ;; RNA
methodELECTRON MICROSCOPY
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Download Data

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2. SAXS Parameters (CRYSOL)

rg_guinier52.85 Å
rg_electron53.15 Å
i02485820000.00
molecular_weight236260.0 kDa
excluded_volume219410 ų
envelope_volume455280 ų
shell_volume77195 ų
envelope_diameter192.4 Å
shell_rg50.68 Å
envelope_rg51.32 Å
shape_rg53.08 Å
total_rg53.20 Å
total_atoms15523
n_residues367
n_harmonics20
q_range— – 0.5000 Å−1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3
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3. P(r) Analysis (GNOM)

dmax187.8 Å
rg_real53.06 Å
rg_real_error2.18 Å
i0_real2.4860e+09
i0_real_error4.9060e+07
rg_reciprocal52.68 Å
i0_reciprocal2484000000.0000
total_estimate0.8150
solution_quality GOOD a GOOD solution
n_peaks2
r_peak_primary56.3 Å
skewness0.526
kurtosis-0.152
angular_range— – 0.1500 Å−1
current_alpha0.0000
highest_alpha77860000.0000
n_real_points31
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.593; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.999; Smooth: 0.813
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4. Crystallography & Experiment

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5. Entities & Polymer Info (1)

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6. Citations (1)

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7. Files & Curves (10)