9rzf
Structure of in-vivo formed alpha-synuclein fibrils purified from a M83+/- mouse brain injected with recombinant 1B fibrils
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9rzf |
| deposition_date | 2025-07-15 |
| title | Structure of in-vivo formed alpha-synuclein fibrils purified from a M83+/- mouse brain injected with recombinant 1B fibrils |
| keywords | Alpha-synuclein, Prion-like, Fibril, Paired helical filament, PROTEIN FIBRIL; PROTEIN FIBRIL |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 27.05 Å |
| rg_electron | 27.02 Å |
| i0 | 21132300.00 |
| molecular_weight | 36096.0 kDa |
| excluded_volume | 45921 ų |
| envelope_volume | 59504 ų |
| shell_volume | 19922 ų |
| envelope_diameter | 86.9 Å |
| shell_rg | 31.88 Å |
| envelope_rg | 26.95 Å |
| shape_rg | 27.01 Å |
| total_rg | 27.68 Å |
| total_atoms | 2538 |
| n_residues | 366 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 86.5 Å |
| rg_real | 27.16 Å |
| rg_real_error | 0.84 Å |
| i0_real | 2.1130e+07 |
| i0_real_error | 3.5980e+05 |
| rg_reciprocal | 27.13 Å |
| i0_reciprocal | 21130000.0000 |
| total_estimate | 0.8835 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 27.9 Å |
| skewness | 0.319 |
| kurtosis | -0.614 |
| angular_range | — – 0.2950 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1327000.0000 |
| n_real_points | 60 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.955; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.837; Smooth: 0.778 |