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9s08

10 ns Intermediate-state of CBD of TtCarH at 30 mJ/cm2 laser fluence (TR-SFX, SACLA), refined against extrapolated structure factors

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Probable transcriptional regulator

Thermus thermophilus

UniProt Q746J7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein homooligomer Homooligomer Protein 4 5'-DEOXYADENOSINE × 4 COBALAMIN × 4 water × 4 Consistent with protein count

Other States of the Same Protein in the Database

Monomer
3whp 5c8f

2 assemblies

Homodimer

None

Homotetramer
5c8a 5c8d 5c8d 5c8f 8c31 8c32 8c33 8c34 8c35 8c36 8c37 8c73

27 assemblies; showing the first 12

Other homooligomers

None

Heteromeric or nucleic-acid complex
5c8e 5c8e

2 assemblies

View Construct and Data Evidence
UniProt name Q746J7_THET2
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–208； UniProt 78–285 Author chain B； PDBConstruct 1–208； UniProt 78–285 Author chain C； PDBConstruct 1–208； UniProt 78–285 Author chain D； PDBConstruct 1–208； UniProt 78–285

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id9s08
Deposition date deposition_date2025-07-16
Structure title title10 ns Intermediate-state of CBD of TtCarH at 30 mJ/cm2 laser fluence (TR-SFX, SACLA), refined against extrapolated structure factors
Keywords keywords;SFX, Room temperature, serial crystallography, CarH, photoreceptor, vitamin B12, cobalamin, coenzyme B12, time-resolved crystallography, DNA BINDING PROTEIN ;; DNA BINDING PROTEIN
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9s08__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9s08__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

9s08__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）29.54 Å
Rg (electron density)28.37 Å
Total Rg29.11 Å
Atom count6384
Residues786
Excluded volume114300 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 9s08__assembly_1__model_1 tetrameric （4） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (4)

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7. Citations (1)