9sdp

Cryo-EM structure of the Arabidopsis thaliana 40S ribosomal subunit

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Small ribosomal subunit protein uS2y

OrganismNot specified

UniProt Q8H173

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RSSA2_ARATH
Isoform —
PDB entities 2
Chains and sequence ranges Author chain BA; PDBConstruct 1–280; UniProt 1–280

Small ribosomal subunit protein eS1z

OrganismNot specified

UniProt Q9CAV0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS3A1_ARATH
Isoform —
PDB entities 3
Chains and sequence ranges Author chain BB; PDBConstruct 1–262; UniProt 1–262

Small ribosomal subunit protein uS5w

OrganismNot specified

UniProt Q9SCM3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS24_ARATH
Isoform —
PDB entities 4
Chains and sequence ranges Author chain BC; PDBConstruct 1–276; UniProt 1–276

Small ribosomal subunit protein eS4z

OrganismNot specified

UniProt Q93VH9

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS41_ARATH
Isoform —
PDB entities 5
Chains and sequence ranges Author chain BE; PDBConstruct 1–261; UniProt 1–261

Small ribosomal subunit protein eS6y

OrganismNot specified

UniProt P51430

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS62_ARATH
Isoform —
PDB entities 6
Chains and sequence ranges Author chain BG; PDBConstruct 1–249; UniProt 1–249

Small ribosomal subunit protein eS7z

OrganismNot specified

UniProt Q9C514

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS71_ARATH
Isoform —
PDB entities 7
Chains and sequence ranges Author chain BH; PDBConstruct 1–191; UniProt 1–191

Small ribosomal subunit protein eS8z

OrganismNot specified

UniProt Q93VG5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS81_ARATH
Isoform —
PDB entities 8
Chains and sequence ranges Author chain BI; PDBConstruct 1–222; UniProt 1–222

Small ribosomal subunit protein uS4y

OrganismNot specified

UniProt Q9FLF0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS92_ARATH
Isoform —
PDB entities 9
Chains and sequence ranges Author chain BJ; PDBConstruct 1–197; UniProt 1–197

Small ribosomal subunit protein uS17z

OrganismNot specified

UniProt P16181

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS111_ARATH
Isoform —
PDB entities 10
Chains and sequence ranges Author chain BL; PDBConstruct 1–160; UniProt 1–160

Small ribosomal subunit protein uS15y

OrganismNot specified

UniProt P59224

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS132_ARATH
Isoform —
PDB entities 11
Chains and sequence ranges Author chain BN; PDBConstruct 1–151; UniProt 1–151

Small ribosomal subunit protein uS11x

OrganismNot specified

UniProt P42036

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS143_ARATH
Isoform —
PDB entities 12
Chains and sequence ranges Author chain cS; PDBConstruct 1–150; UniProt 1–150

Small ribosomal subunit protein eS21z

OrganismNot specified

UniProt Q9M337

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS211_ARATH
Isoform —
PDB entities 13
Chains and sequence ranges Author chain BV; PDBConstruct 1–82; UniProt 1–82

Small ribosomal subunit protein uS8z/uS8w

OrganismNot specified

UniProt P42798

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name R15A1_ARATH
Isoform —
PDB entities 14
Chains and sequence ranges Author chain BW; PDBConstruct 1–130; UniProt 1–130

Small ribosomal subunit protein uS12y

OrganismNot specified

UniProt P49201

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS232_ARATH
Isoform —
PDB entities 15
Chains and sequence ranges Author chain BX; PDBConstruct 1–142; UniProt 1–142

Small ribosomal subunit protein eS24z

OrganismNot specified

UniProt Q9SS17

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS241_ARATH
Isoform —
PDB entities 16
Chains and sequence ranges Author chain BY; PDBConstruct 1–133; UniProt 1–133

Small ribosomal subunit protein eS26x

OrganismNot specified

UniProt Q9LYK9

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS263_ARATH
Isoform —
PDB entities 17
Chains and sequence ranges Author chain BZ; PDBConstruct 1–130; UniProt 1–130

Small ribosomal subunit protein eS27y

OrganismNot specified

UniProt Q9M2F1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS272_ARATH
Isoform —
PDB entities 18
Chains and sequence ranges Author chain Bb; PDBConstruct 1–86; UniProt 1–86

Small ribosomal subunit protein eS30z/eS30y/eS30x

OrganismNot specified

UniProt P49689

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v × 1 (P62120) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS30_ARATH
Isoform —
PDB entities 19
Chains and sequence ranges Author chain Be; PDBConstruct 1–62; UniProt 1–62

Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v

OrganismNot specified

UniProt P62120

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 19 RNA 1 18S RNA × 1 Small ribosomal subunit protein uS2y × 1 (Q8H173) Small ribosomal subunit protein eS1z × 1 (Q9CAV0) Small ribosomal subunit protein uS5w × 1 (Q9SCM3) Small ribosomal subunit protein eS4z × 1 (Q93VH9) Small ribosomal subunit protein eS6y × 1 (P51430) Small ribosomal subunit protein eS7z × 1 (Q9C514) Small ribosomal subunit protein eS8z × 1 (Q93VG5) Small ribosomal subunit protein uS4y × 1 (Q9FLF0) Small ribosomal subunit protein uS17z × 1 (P16181) Small ribosomal subunit protein uS15y × 1 (P59224) Small ribosomal subunit protein uS11x × 1 (P42036) Small ribosomal subunit protein eS21z × 1 (Q9M337) Small ribosomal subunit protein uS8z/uS8w × 1 (P42798) Small ribosomal subunit protein uS12y × 1 (P49201) Small ribosomal subunit protein eS24z × 1 (Q9SS17) Small ribosomal subunit protein eS26x × 1 (Q9LYK9) Small ribosomal subunit protein eS27y × 1 (Q9M2F1) Small ribosomal subunit protein eS30z/eS30y/eS30x × 1 (P49689) POTASSIUM ION × 3 MAGNESIUM ION × 14 ZINC ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS32_ARATH
Isoform —
PDB entities 20
Chains and sequence ranges Author chain Cn; PDBConstruct 1–25; UniProt 1–25

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id9sdp
Deposition date deposition_date2025-08-14
Structure title titleCryo-EM structure of the Arabidopsis thaliana 40S ribosomal subunit
Keywords keywordsArabidopsis, Ribosome, CryoEM; RIBOSOME
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9sdp__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9sdp__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

9sdp__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)59.74 Å
Rg (electron density)60.93 Å
Total Rg60.89 Å
Atom count44802
Residues3765
Excluded volume716220 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 9sdp__assembly_1__model_1 20-meric (20) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (23)

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7. Citations (1)