9t61

Doxycycline Bound C. burnetii 30S Ribosome

Method: ELECTRON MICROSCOPY

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1. Protein Identity and Related Structures Protein Identity & Related Structures

Large ribosomal subunit protein bL31

OrganismNot specified

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RL31_COXBU
Isoform	—
PDB entities	1
Chains and sequence ranges	Author chain 4； PDBConstruct 1–79； UniProt 1–79

Small ribosomal subunit protein uS3

OrganismNot specified

UniProt O85388

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS3_COXBU
Isoform	—
PDB entities	3
Chains and sequence ranges	Author chain C； PDBConstruct 1–227； UniProt 1–227

Small ribosomal subunit protein uS4

OrganismNot specified

UniProt Q83EQ3

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS4_COXBU
Isoform	—
PDB entities	4
Chains and sequence ranges	Author chain D； PDBConstruct 1–206； UniProt 1–206

Small ribosomal subunit protein uS5

OrganismNot specified

UniProt Q83EQ9

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS5_COXBU
Isoform	—
PDB entities	5
Chains and sequence ranges	Author chain E； PDBConstruct 1–168； UniProt 1–168

Small ribosomal subunit protein bS6

OrganismNot specified

UniProt Q83D76

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS6_COXBU
Isoform	—
PDB entities	6
Chains and sequence ranges	Author chain F； PDBConstruct 1–127； UniProt 1–127

Small ribosomal subunit protein uS7

OrganismNot specified

UniProt Q83ES8

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS7_COXBU
Isoform	—
PDB entities	7
Chains and sequence ranges	Author chain G； PDBConstruct 1–191； UniProt 1–191

Small ribosomal subunit protein uS8

OrganismNot specified

UniProt Q83ER2

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS8_COXBU
Isoform	—
PDB entities	8
Chains and sequence ranges	Author chain H； PDBConstruct 1–130； UniProt 1–130

Small ribosomal subunit protein uS9

OrganismNot specified

UniProt Q83AX9

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS9_COXBU
Isoform	—
PDB entities	9
Chains and sequence ranges	Author chain I； PDBConstruct 1–139； UniProt 1–139

Small ribosomal subunit protein uS11

OrganismNot specified

UniProt Q83EQ4

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS11_COXBU
Isoform	—
PDB entities	10
Chains and sequence ranges	Author chain K； PDBConstruct 1–123； UniProt 1–123

Small ribosomal subunit protein uS12

OrganismNot specified

UniProt Q83ES9

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS12_COXBU
Isoform	—
PDB entities	11
Chains and sequence ranges	Author chain L； PDBConstruct 1–124； UniProt 1–124

Small ribosomal subunit protein uS13

OrganismNot specified

UniProt P59753

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS13_COXBU
Isoform	—
PDB entities	12
Chains and sequence ranges	Author chain M； PDBConstruct 1–119； UniProt 1–119

Small ribosomal subunit protein uS14

OrganismNot specified

UniProt Q83ER3

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	Q83ER3_COXBU
Isoform	—
PDB entities	13
Chains and sequence ranges	Author chain N； PDBConstruct 1–99； UniProt 1–99

Small ribosomal subunit protein uS15

OrganismNot specified

UniProt Q83D88

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS15_COXBU
Isoform	—
PDB entities	14
Chains and sequence ranges	Author chain O； PDBConstruct 1–89； UniProt 1–89

Small ribosomal subunit protein bS16

OrganismNot specified

UniProt Q83E83

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS16_COXBU
Isoform	—
PDB entities	15
Chains and sequence ranges	Author chain P； PDBConstruct 1–137； UniProt 1–137

Small ribosomal subunit protein uS17

OrganismNot specified

UniProt Q83ER7

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS17_COXBU
Isoform	—
PDB entities	16
Chains and sequence ranges	Author chain Q； PDBConstruct 1–89； UniProt 1–89

Small ribosomal subunit protein bS18

OrganismNot specified

UniProt Q83D75

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS18_COXBU
Isoform	—
PDB entities	17
Chains and sequence ranges	Author chain R； PDBConstruct 1–73； UniProt 1–73

Small ribosomal subunit protein uS19

OrganismNot specified

UniProt Q83ES0

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS19_COXBU
Isoform	—
PDB entities	18
Chains and sequence ranges	Author chain S； PDBConstruct 1–95； UniProt 1–95

Small ribosomal subunit protein bS20

OrganismNot specified

UniProt Q83ED6

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS20_COXBU
Isoform	—
PDB entities	19
Chains and sequence ranges	Author chain T； PDBConstruct 1–90； UniProt 1–90

Small ribosomal subunit protein bS21

OrganismNot specified

UniProt Q83BB9

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） P-site tRNA-Met × 1 Small ribosomal subunit protein uS10 × 1 （Q83ES5） ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS21_COXBU
Isoform	—
PDB entities	20
Chains and sequence ranges	Author chain U； PDBConstruct 1–74； UniProt 1–74

Small ribosomal subunit protein uS10

OrganismNot specified

UniProt Q83ES5

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 20 RNA 2	Large ribosomal subunit protein bL31 × 1 （Q83D39） 16S ribosomal RNA × 1 Small ribosomal subunit protein uS3 × 1 （O85388） Small ribosomal subunit protein uS4 × 1 （Q83EQ3） Small ribosomal subunit protein uS5 × 1 （Q83EQ9） Small ribosomal subunit protein bS6 × 1 （Q83D76） Small ribosomal subunit protein uS7 × 1 （Q83ES8） Small ribosomal subunit protein uS8 × 1 （Q83ER2） Small ribosomal subunit protein uS9 × 1 （Q83AX9） Small ribosomal subunit protein uS11 × 1 （Q83EQ4） Small ribosomal subunit protein uS12 × 1 （Q83ES9） Small ribosomal subunit protein uS13 × 1 （P59753） Small ribosomal subunit protein uS14 × 1 （Q83ER3） Small ribosomal subunit protein uS15 × 1 （Q83D88） Small ribosomal subunit protein bS16 × 1 （Q83E83） Small ribosomal subunit protein uS17 × 1 （Q83ER7） Small ribosomal subunit protein bS18 × 1 （Q83D75） Small ribosomal subunit protein uS19 × 1 （Q83ES0） Small ribosomal subunit protein bS20 × 1 （Q83ED6） Small ribosomal subunit protein bS21 × 1 （Q83BB9） P-site tRNA-Met × 1 ;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ; × 1 POTASSIUM ION × 34 MAGNESIUM ION × 54 ZINC ION × 2 water × 3	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS10_COXBU
Isoform	—
PDB entities	22
Chains and sequence ranges	Author chain J； PDBConstruct 1–110； UniProt 1–110

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id	9t61
Deposition date deposition_date	2025-11-06
Structure title title	Doxycycline Bound C. burnetii 30S Ribosome
Keywords keywords	Ribosome, C. burnetii, 30S subunit, antibiotic, doxycycline, pathogen, cryo-EM; RIBOSOME
Experimental Method method	ELECTRON MICROSCOPY

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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9t61__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9t61__assembly_1__model_1 | I(q)

100 plotted points; both axes use logarithmic scales.

9t61__assembly_1__model_1 | P(r) · Pending

P(r) will be calculated and displayed separately for the same assembly/model.

Rg（Guinier）	67.01 Å
Rg (electron density)	67.45 Å
Total Rg	67.43 Å
Atom count	51196
Residues	3783
Excluded volume	791990 Å³
Maximum q	0.500 Å⁻¹

Assembly	Model	Structure unit	Oligomeric description	Status	CRYSOL	Actions
1	1	`9t61__assembly_1__model_1`	22-meric （22）	Success	4.1.3-1-20251215 (887e7ef)	View Download

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4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (27)

Entity 1 Entity 1 polymer

Description description	Large ribosomal subunit protein bL31
Molecular weight formula_weight	9096.5 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	4
Atom count atom_count	51204

MKENIHPPYKQIKVTCSCGNTFMTGSTLDRELHLEICSACHPFYTGQQKMVDTAGRVERFRKKYAKRRAANASPEDEKK

Entity 2 Entity 2 polymer

Description description	16S ribosomal RNA
Molecular weight formula_weight	497437.7 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polyribonucleotide
Chain IDs strand_id	A

AAUUGAAGAGUUUGAUUCUGGCUCAGAUUGAACGCUAGCGGCAUGCUUAACACAUGCAAGUCGAACGGCAGCGCGGGGAGCUUGCUCCCUGGCGGCGAGUGGCGGACGGGUGAGUAAUGCGUAGGAAUCUACCUUGUAGUGGGGGAUAACCUGGGGAAACUCGGGCUAAUACCGCAUAAUCUCUUUGGAGCAAAGCGGGGGAUCUUCGGACCUCGUGCUAUAAGAUGAGCCUACGUCGGAUUAGCUUGUUGGUGGGGUAAUGGCCUACCAAGGCGACGAUCCGUAGCUGGUCUGAGAGGACGAUCAGCCACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGGACAAUGGGGGAAACCCUGAUCCAGCAAUGCCGCGUGUGUGAAGAAGGCCUUCGGGUUGUAAAGCACUUUCGGUGGGGAAGAAAUUCUCAAGGGUAAUAUCCUUGGGCGUUGACGUUACCCACAGAAGAAGCACUGGCUAACUCUGUGCCAGCAGCCGCGGUAAUACAGAGAGUGCAAGCGUUAAUCGGAAUCACUGGGCGUAAAGCGCGCGUAGGUGGAUAUUUAAGUCGGAUGUGAAAGCCCUGGGCUUAACCUGGGAAUUGCACCCGAUACUGGGUAUCUUGAGUAUGGUAGAGGGAAGUGGAAUUUCCGGUGUAGCGGUGAAAUGCGUAGAUAUCGGAAAGAACACCAGUGGCGAAGGCGACUUCCUGGACCAAUACUGACACUGAGGCGCGAAAGCGUGGGGAGCAAACAGGAUUAGAGACCCUGGUAGUCCACGCCGUCAACGAUGAGAACUAGCUGUUGGGAAGUUCACUUCUUAGUAGCGAAGCUAACGCGUUAAGUUCUCCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAGAAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAAAACCUUACCUACCCUUGACAUCCUCGGAACUUGUCAGAGAUGAUUUGGUGCCUUCGGGAACCGAGUGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGUAACGAGCGCAACCCUCGUCCUUAGUUGCCAGCGAGUCAAGUCGGGAACUCUAAGGAGACUGCCGGUGAUAAACCGGAGGAAGGUGGGGAUGAUGUCAAGUCAUCAUGGCCCUUACGGGUAGGGCUACACACGUGCUACAAUGGGCAGUACAAAGGGUUGCCAAGCCGCGAGGUGGAGCUAAUCCCAGAAAACUGCUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUUGGAAUCGCUAGUAAUCGCGAAUCAGCAUGUCGCGGUGAAUACGUUCUCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGAAUUGUACCAGAAGCGGGUAGGCUAACCUUCGGGAGGCCGCUCACCACGGUAUGAUCCAUGACUGGGGUGAAGUCGUAACAAGGUAGCCGUAGGGGAACCUGCGGCUGGAUCACCUC

Entity 3 Entity 3 polymer

Description description	Small ribosomal subunit protein uS3
Molecular weight formula_weight	25671.7 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	C

MGQKVNPVGMRIGITRDWTSNWYADKKDFADRLNEDLNVRQLLQKRLKGAAVSRIQIERPARNAKIIIHSARPGVIIGKKGGEIEALRDEIFKVMKVPVHITIEEVRKPELDAKLVAENIAQQLERRVMFRRAMKRAVQNTLRQGALGVKISVSGRLGGAEIARTEWYREGRVPLHTFRADIDYATASAKTTYGIIGVKVWIFKGEVHAPKPQAEEAAPQETEEEVK

Entity 4 Entity 4 polymer

Description description	Small ribosomal subunit protein uS4
Molecular weight formula_weight	23770.7 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	D

MARYLGPKCRLSRREKTDLQLKSGIRAIDSKCNIERIPGMHWQRRGRTTDYGVQLRMKQMIKRYYDVLEKQFANYYKQADRLKGSTGDNLLKLLESRLDNVVYRMGFAATRAEARQLISHKAILVNGEVVNIPSYQVKPGDIIEVRSRAKGQLRIKGALELAQQRAPISWIEVDTKKMTGTFKEQPDVAELPAEFKVNLVVELYSK

Entity 5 Entity 5 polymer

Description description	Small ribosomal subunit protein uS5
Molecular weight formula_weight	17510.3 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	E

MQEAGIGTTTDGIQEKLVAVRRTAKVVKGGRVFGFSALVVAGDGDGKVGFGLGKAREVPSAIQKATENARRNMISVPLYGATLHHAIKATHASSTVLMLPASEGTGVIAGNAMRAIFEVMGVQNVLAKCIGSSNPINVVRATFKGLKQMETPESVAAKRGKAIEEIVE

Entity 6 Entity 6 polymer

Description description	Small ribosomal subunit protein bS6
Molecular weight formula_weight	14603.7 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	F

MRHYEIVILVHPDQSSQVPAMVERYQSMIKEKDGKVHRLEDWGRRQLAYSIDKVHKAHYLLMNIESDQGVISELENAFRYNDAVIRSLILKRDHAITKSSLIMQGAEKGKSSRKEKVAAEAEASEEA

Entity 7 Entity 7 polymer

Description description	Small ribosomal subunit protein uS7
Molecular weight formula_weight	21334.7 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	G

MARRKAAPKRETLPDPLFHSELLAKFINAVMRNGKKSVAEKIVYGALDVVAKRVQNKSGEQGDGDGESGGKAGGIKKRSLGDIRTDENARALALETFKGALDKVMPNVEVKSRRVGGSTYQVPVEIRMARRQALARRWLVEYANKRNEKTMVLRLAHEILDAVEGRGGAIKKREDVHRMAKANQAFAHYKW

Entity 8 Entity 8 polymer

Description description	Small ribosomal subunit protein uS8
Molecular weight formula_weight	14592.0 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	H

MMQDPISDMLTRIRNAQAVRKKEVVMPRSKLKMSIANVLKEEGYIVDYREEGDLTKAQLVITLKYHEGESVISEIRRVSSPALQVYKSKDELPKVKNGLGIAIISTSKGVMSDRQARRLGEGGEVLCYVS

Entity 9 Entity 9 polymer

Description description	Small ribosomal subunit protein uS9
Molecular weight formula_weight	15332.5 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	I

MAQAAKKQNLGTGRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQSRFDVYATVQGGGDSGQAGAIRHGITRALIQYDEEGGEGGTWRSTLRKAGFVTRDPRMVERKKVGLHGARRGTQFSKR

Entity 10 Entity 10 polymer

Description description	Small ribosomal subunit protein uS11
Molecular weight formula_weight	13534.7 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	K

MAKKRYRKVTEGIAHIKATFNNTMISVSDPQGNVLCFRSAGGSGFKGSRKGTPYGAQMASEEVGRLARDNFDMRRIAVRVKGPGAGRDSAIRGLRSAGLEVIHLEDRTPLPHNGCRPRKKRRV

Entity 11 Entity 11 polymer

Description description	Small ribosomal subunit protein uS12
Molecular weight formula_weight	13786.1 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	L

MARINQLVRKPRRARAKKSDVPALEGCPQRRGVCTRVYTTTPKKPNSALRKVARVRITNGAEVTAYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGSLDTAGVSGRRRGRSKYGEKKPKE

Entity 12 Entity 12 polymer

Description description	Small ribosomal subunit protein uS13
Molecular weight formula_weight	13420.7 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	M

MAARIAGVNIPVQKHARIALQAIYGIGNSRALEICKEAKIDPATKVKDLSEAELDALRTEVGKFSVEGDLRRERSMDIKRKMDLGAYEGIRHRRGLPLRGQRTRSNARTRKGKRKPIRS

Entity 13 Entity 13 polymer

Description description	Small ribosomal subunit protein uS14
Molecular weight formula_weight	11600.0 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	N

MAKLSVIERNKKRVRKSQSARKKRLELKKIIKKGTPEEQEQALLKLQKRPRDESPVRTRDRCRLCGRPCGTFKKFGLCRIHLREAAMRADVPGLKKASW

Entity 14 Entity 14 polymer

Description description	Small ribosomal subunit protein uS15
Molecular weight formula_weight	10340.2 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	O

MSLASAETAKIVKEYQLGKDDTGSPEVQVAILTAKIIKLTDHMKAHKHDHHSRRGLLRMVSQRRKLLNFLKRNDLQRYLKLIERLGLRS

Entity 15 Entity 15 polymer

Description description	Small ribosomal subunit protein bS16
Molecular weight formula_weight	15592.9 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	P

MVVIRLARGGSKKNPFYHIVVADRRKPRDGRFIERVGYYNPMARGQDIRLQLEKERISHWLNQGAQTSLRVKHLIKKLEKSPEEAQKGGMRKGEFKRLQAEQAAKAQKKAVATEEPKAEEAKEAPPAESQAAEGKEE

Entity 16 Entity 16 polymer

Description description	Small ribosomal subunit protein uS17
Molecular weight formula_weight	10328.1 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	Q

MNKNEKMVRSLMGTVVSNKMNDTVVVRVERRVKHPKYGKFIKRSTKIHAHDKGNEGQIGDIVTIRECRPISKTKSWTLVKINERAEKVE

Entity 17 Entity 17 polymer

Description description	Small ribosomal subunit protein bS18
Molecular weight formula_weight	8569.0 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	R

MSFRRKKFCAFDAKNLQEIDYKDVNTLKDYIMESGRVVPSRITGTCAKHQRQISRAIKLARYLALLPYCDTHQ

Entity 18 Entity 18 polymer

Description description	Small ribosomal subunit protein uS19
Molecular weight formula_weight	10842.6 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	S

MPRSTNKGPFVDHHLMKKVDQAQKEGSKRPIKTWSRRSMVVPEMVGLTIAIHNGRQHVPVYISENMVGHKLGEFAITRTFRAHSGDRKAKKEGEK

Entity 19 Entity 19 polymer

Description description	Small ribosomal subunit protein bS20
Molecular weight formula_weight	9981.5 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	T

MANSAQAKKRARQNEKRELHNASQRSAVRTAVKKILKSLQANDSSAAQSAYQHAVQILDKAAGRRIIHPNKAARLKSRLSQKIKNLSSSQ

Entity 20 Entity 20 polymer

Description description	Small ribosomal subunit protein bS21
Molecular weight formula_weight	8927.5 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	U

MPMIDVPDNNAFDVAMRRFKRACEKAGILSKLRQIEYYEKPTSKRKRKRAAAVKRYAKKLQKEQEALERERTRY

Entity 21 Entity 21 polymer

Description description	P-site tRNA-Met
Molecular weight formula_weight	24749.7 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polyribonucleotide
Chain IDs strand_id	Y

UGCGGGGUGGAGCAGUCUGGCAGCUCGUCGGGCUCAUAACCCGAAGGUCGUAGGUUCAAAUCCUACCCCCGCUACCA

Entity 22 Entity 22 polymer

Description description	Small ribosomal subunit protein uS10
Molecular weight formula_weight	12614.6 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	J

MSDNQRIRIRLKAFDHRLIDRSTREIVETARRTGAIIRGPILLPTKIERYTVLISPNIDKDARDQYEIRTHKRLVDISEPTDKTVDALMKLDLAAGVDVQIELLNKKSGA

Entity 23 Entity 23 non-polymer

Description description	;(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE ;
Molecular weight formula_weight	444.4 kDa
Source method src_method	syn
Copy count entity_count	1

Entity 24 Entity 24 non-polymer

Description description	POTASSIUM ION
Molecular weight formula_weight	39.1 kDa
Source method src_method	syn
Copy count entity_count	34

Entity 25 Entity 25 non-polymer

Description description	MAGNESIUM ION
Molecular weight formula_weight	24.3 kDa
Source method src_method	syn
Copy count entity_count	54

Entity 26 Entity 26 non-polymer

Description description	ZINC ION
Molecular weight formula_weight	65.4 kDa
Source method src_method	syn
Copy count entity_count	2

Entity 27 Entity 27 water

Description description	water
Molecular weight formula_weight	18.0 kDa
Source method src_method	nat
Copy count entity_count	8

▶

Unit-cell length a length_a	1.000 Å
Unit-cell length b length_b	1.000 Å
Unit-cell length c length_c	1.000 Å
Unit-cell angle α angle_alpha	90.00 °
Unit-cell angle β angle_beta	90.00 °
Unit-cell angle γ angle_gamma	90.00 °
Molecules per unit cell Z z_pdb	—

Space group space_group	P 1
Space-group number int_tables_number	1
Crystal system crystal_system	—

Resolution resolution	3.06 Å
Resolution测定Method resolution_method	—
颗粒数 num_particles	10803

Doxycycline Bound C. burnetii 30S Ribosome

1. Protein Identity and Related Structures Protein Identity & Related Structures

Large ribosomal subunit protein bL31

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Small ribosomal subunit protein uS3

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Small ribosomal subunit protein uS4

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Small ribosomal subunit protein uS5

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Small ribosomal subunit protein bS6

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Small ribosomal subunit protein uS7

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Small ribosomal subunit protein uS8

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Small ribosomal subunit protein uS9

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Small ribosomal subunit protein uS11

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Small ribosomal subunit protein uS12

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer