9u00
Crystal structure of NbH10, a nanobody against the PWWP domains of LEDGF and HRP-2
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9u00 |
| deposition_date | 2026-01-25 |
| last_revision | 2026-06-10 |
| title | Crystal structure of NbH10, a nanobody against the PWWP domains of LEDGF and HRP-2 |
| keywords | nanobody, single-domain antibody, inhibitor, IMMUNE SYSTEM; IMMUNE SYSTEM |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 23.74 Å |
| rg_electron | 23.04 Å |
| i0 | 11715200.00 |
| molecular_weight | 24249.0 kDa |
| excluded_volume | 29853 ų |
| envelope_volume | 43477 ų |
| shell_volume | 17038 ų |
| envelope_diameter | 84.6 Å |
| shell_rg | 28.05 Å |
| envelope_rg | 23.60 Å |
| shape_rg | 23.01 Å |
| total_rg | 23.90 Å |
| total_atoms | 1707 |
| n_residues | 231 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 79.8 Å |
| rg_real | 23.83 Å |
| rg_real_error | 0.76 Å |
| i0_real | 1.1720e+07 |
| i0_real_error | 1.8060e+05 |
| rg_reciprocal | 23.81 Å |
| i0_reciprocal | 11720000.0000 |
| total_estimate | 0.6153 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 69.9 Å |
| skewness | 0.318 |
| kurtosis | -0.567 |
| angular_range | — – 0.3350 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 2543000.0000 |
| n_real_points | 65 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.795; Stabil: 0.999; Sysdev: 0.286; Positv: 1.000; Valcen: 0.756; Smooth: 0.000 |