9up9
Cystal Structure of Shark VNAR Nanobody
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9up9 |
| deposition_date | 2025-04-28 |
| title | Cystal Structure of Shark VNAR Nanobody |
| keywords | Shark VNAR Nanobody, IMMUNE SYSTEM; IMMUNE SYSTEM |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 15.06 Å |
| rg_electron | 14.10 Å |
| i0 | 2908800.00 |
| molecular_weight | 11818.0 kDa |
| excluded_volume | 14733 ų |
| envelope_volume | 16780 ų |
| shell_volume | 10639 ų |
| envelope_diameter | 54.2 Å |
| shell_rg | 19.19 Å |
| envelope_rg | 14.50 Å |
| shape_rg | 14.10 Å |
| total_rg | 15.18 Å |
| total_atoms | 834 |
| n_residues | 106 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 54.2 Å |
| rg_real | 15.07 Å |
| rg_real_error | 0.43 Å |
| i0_real | 2.9090e+06 |
| i0_real_error | 3.3150e+04 |
| rg_reciprocal | 15.07 Å |
| i0_reciprocal | 2909000.0000 |
| total_estimate | 0.5811 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 3 |
| r_peak_primary | 17.1 Å |
| skewness | 0.419 |
| kurtosis | -0.076 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 794800.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.628; Stabil: 0.995; Sysdev: 0.256; Positv: 1.000; Valcen: 0.912; Smooth: 0.000 |