UDP-Glc:tetrahydrobiopterin glucosyltransferase from Pseudanabaena sp. Chao 1811

Method: X-RAY DIFFRACTION D_max: 97.1 Å Quality: EXCELLENT

SAXS Profile

P(r) Distribution

▼

1. Structure Basics

entry_id	9v0w
deposition_date	2025-05-19
title	UDP-Glc:tetrahydrobiopterin glucosyltransferase from Pseudanabaena sp. Chao 1811
keywords	UDP-Glc:tetrahydrobiopterin glucosyltransferase, TRANSFERASE; TRANSFERASE
method	X-RAY DIFFRACTION

▼

Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

▼

2. SAXS Parameters (CRYSOL)

rg_guinier	30.56 Å
rg_electron	29.86 Å
i0	95344400.00
molecular_weight	78735.0 kDa
excluded_volume	99271 Å³
envelope_volume	123130 Å³
shell_volume	34522 Å³
envelope_diameter	97.8 Å
shell_rg	36.82 Å
envelope_rg	29.54 Å
shape_rg	29.86 Å
total_rg	30.54 Å
total_atoms	5548
n_residues	715
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

▼

3. P(r) Analysis (GNOM)

dmax	97.1 Å
rg_real	30.50 Å
rg_real_error	0.56 Å
i0_real	9.5340e+07
i0_real_error	1.3490e+06
rg_reciprocal	30.53 Å
i0_reciprocal	95350000.0000
total_estimate	0.9083
solution_quality	EXCELLENT a EXCELLENT solution
n_peaks	2
r_peak_primary	33.6 Å
skewness	0.209
kurtosis	-0.625
angular_range	— – 0.2600 Å⁻¹
current_alpha	0.0000
highest_alpha	24920000.0000
n_real_points	53
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.948; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.990; Smooth: 0.970

▶

4. Crystallography & Experiment

▶

5. Entities & Polymer Info (2)

▶

6. Citations (1)

▶

length_a	162.213 Å
length_b	162.213 Å
length_c	181.952 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	120.00 °
z_pdb	24

space_group	P 61 2 2
int_tables_number	178
crystal_system	hexagonal

resolution	2.800 Å
resolution_low	13.250 Å
r_factor	0.2412
r_work	0.2397
r_free	0.2723

description	tetrahydrobiopterin glucosyltransferase
formula_weight	40203.8 kDa
src_method	man
entity_count	2

type	polypeptide(L)
strand_id	A,B
atom_count	5640

UDP-Glc:tetrahydrobiopterin glucosyltransferase from Pseudanabaena sp. Chao 1811

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 water

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	Pseudanabaena sp. Chao 1811
ncbi_taxonomy_id	2963092
host_organism	Escherichia coli

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	92

fit	/app/data/saxs_computation/v0/9v0w/9v0w.fit
pddf	/app/data/pr_computation/v0/9v0w/9v0w.pr.out
profile	/app/data/saxs_computation/v0/9v0w/9v0w.dat