9vnk
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph2
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9vnk |
| deposition_date | 2025-06-30 |
| title | Cryo-EM structure of hnRAC1-2,8beta fibril polymorph2 |
| keywords | beta amino acid modified peptide, PROTEIN FIBRIL; PROTEIN FIBRIL |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 31.80 Å |
| rg_electron | 32.32 Å |
| i0 | 45980200.00 |
| molecular_weight | 46865.0 kDa |
| excluded_volume | 55320 ų |
| envelope_volume | 72967 ų |
| shell_volume | 21551 ų |
| envelope_diameter | 116.7 Å |
| shell_rg | 33.68 Å |
| envelope_rg | 32.69 Å |
| shape_rg | 32.30 Å |
| total_rg | 32.49 Å |
| total_atoms | 3348 |
| n_residues | 378 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 114.5 Å |
| rg_real | 32.36 Å |
| rg_real_error | 1.30 Å |
| i0_real | 4.5980e+07 |
| i0_real_error | 8.2340e+05 |
| rg_reciprocal | 32.13 Å |
| i0_reciprocal | 45970000.0000 |
| total_estimate | 0.8046 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 29.8 Å |
| skewness | 0.620 |
| kurtosis | -0.174 |
| angular_range | — – 0.2500 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1945000.0000 |
| n_real_points | 51 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.663; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.497; Smooth: 0.971 |