9vnm
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph1
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9vnm |
| deposition_date | 2025-06-30 |
| title | Cryo-EM structure of hnRAC1-2,8beta fibril polymorph1 |
| keywords | beta amino acid modified peptide, PROTEIN FIBRIL; PROTEIN FIBRIL |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 33.27 Å |
| rg_electron | 33.36 Å |
| i0 | 55965400.00 |
| molecular_weight | 52072.0 kDa |
| excluded_volume | 61467 ų |
| envelope_volume | 82481 ų |
| shell_volume | 22475 ų |
| envelope_diameter | 109.2 Å |
| shell_rg | 36.30 Å |
| envelope_rg | 33.42 Å |
| shape_rg | 33.35 Å |
| total_rg | 33.61 Å |
| total_atoms | 3720 |
| n_residues | 420 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 110.5 Å |
| rg_real | 33.53 Å |
| rg_real_error | 1.33 Å |
| i0_real | 5.5970e+07 |
| i0_real_error | 1.0410e+06 |
| rg_reciprocal | 33.43 Å |
| i0_reciprocal | 55960000.0000 |
| total_estimate | 0.8726 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 32.2 Å |
| skewness | 0.315 |
| kurtosis | -0.711 |
| angular_range | — – 0.2400 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1712000.0000 |
| n_real_points | 49 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.905; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.708; Smooth: 0.918 |