← Back to search
← Back to search
9vsx

Peptide Asparaginyl Ligases from Viola dissecta

Method: X-RAY DIFFRACTION Dmax: 99.5 Å Quality: EXCELLENT

SAXS Profile

SAXS profile for 9vsx

P(r) Distribution

P(r) distribution for 9vsx
▼

1. Structure Basics

entry_id9vsx
deposition_date2025-07-09
last_revision2026-03-11
titlePeptide Asparaginyl Ligases from Viola dissecta
keywordsPeptide asparaginyl ligase, plant legumain, LIGASE; LIGASE
methodX-RAY DIFFRACTION
▼

Download Data

▼

2. SAXS Parameters (CRYSOL)

rg_guinier31.30 Å
rg_electron30.48 Å
i0147055000.00
molecular_weight95510.0 kDa
excluded_volume118990 ų
envelope_volume145930 ų
shell_volume39356 ų
envelope_diameter106.1 Å
shell_rg37.96 Å
envelope_rg30.55 Å
shape_rg30.46 Å
total_rg31.20 Å
total_atoms6717
n_residues854
n_harmonics20
q_range— – 0.5000 Å−1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3
▼

3. P(r) Analysis (GNOM)

dmax99.5 Å
rg_real31.24 Å
rg_real_error0.62 Å
i0_real1.4710e+08
i0_real_error2.2820e+06
rg_reciprocal31.27 Å
i0_reciprocal147100000.0000
total_estimate0.9038
solution_quality EXCELLENT a EXCELLENT solution
n_peaks2
r_peak_primary33.2 Å
skewness0.237
kurtosis-0.573
angular_range— – 0.2550 Å−1
current_alpha0.0000
highest_alpha31820000.0000
n_real_points52
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.936; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.991; Smooth: 0.947
▶

4. Crystallography & Experiment

▶

5. Entities & Polymer Info (3)

▶

6. Citations (1)

▶

7. Files & Curves (10)