9vuo
Crystal structure of the DNA/RNA hybrid with Tica
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9vuo |
| deposition_date | 2025-07-13 |
| last_revision | 2026-02-11 |
| title | Crystal structure of the DNA/RNA hybrid with Tica |
| keywords | DNA/RNA hybrid, Tica, DNA-RNA HYBRID; DNA-RNA HYBRID |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 14.35 Å |
| rg_electron | 13.96 Å |
| i0 | 5206540.00 |
| molecular_weight | 8636.0 kDa |
| excluded_volume | 6827 ų |
| envelope_volume | 11883 ų |
| shell_volume | 8066 ų |
| envelope_diameter | 48.0 Å |
| shell_rg | 18.17 Å |
| envelope_rg | 13.84 Å |
| shape_rg | 13.99 Å |
| total_rg | 14.46 Å |
| total_atoms | 613 |
| n_residues | 28 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 48.1 Å |
| rg_real | 14.36 Å |
| rg_real_error | 0.43 Å |
| i0_real | 5.2070e+06 |
| i0_real_error | 6.7250e+04 |
| rg_reciprocal | 14.36 Å |
| i0_reciprocal | 5207000.0000 |
| total_estimate | 0.8692 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 17.0 Å |
| skewness | 0.356 |
| kurtosis | -0.234 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 151600.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.793; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.970; Smooth: 0.947 |