9vvq
Structure of the bacteriophage E1004 capsid
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9vvq |
| deposition_date | 2025-07-16 |
| title | Structure of the bacteriophage E1004 capsid |
| keywords | Complex, VIRAL PROTEIN; VIRAL PROTEIN |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 59.41 Å |
| rg_electron | 59.56 Å |
| i0 | 902130000.00 |
| molecular_weight | 248500.0 kDa |
| excluded_volume | 310610 ų |
| envelope_volume | 538510 ų |
| shell_volume | 76537 ų |
| envelope_diameter | 237.2 Å |
| shell_rg | 57.30 Å |
| envelope_rg | 61.03 Å |
| shape_rg | 59.55 Å |
| total_rg | 59.55 Å |
| total_atoms | 17474 |
| n_residues | 2393 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 213.9 Å |
| rg_real | 59.77 Å |
| rg_real_error | 2.49 Å |
| i0_real | 9.0210e+08 |
| i0_real_error | 1.9750e+07 |
| rg_reciprocal | 59.09 Å |
| i0_reciprocal | 901100000.0000 |
| total_estimate | 0.8560 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 65.8 Å |
| skewness | 0.444 |
| kurtosis | -0.243 |
| angular_range | — – 0.1300 Å−1 |
| current_alpha | 0.0002 |
| highest_alpha | 63240000.0000 |
| n_real_points | 27 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.808; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.988; Smooth: 0.712 |