9whd
Crystal Structure of a GH167 Enzyme from Wenyingzhuangia aestuarii
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9whd |
| deposition_date | 2025-08-26 |
| last_revision | 2025-10-01 |
| title | Crystal Structure of a GH167 Enzyme from Wenyingzhuangia aestuarii |
| keywords | Glycosyl hydrolases, GH167, Catalytic Domain, Apo form, HYDROLASE; HYDROLASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 42.12 Å |
| rg_electron | 42.19 Å |
| i0 | 398316000.00 |
| molecular_weight | 168350.0 kDa |
| excluded_volume | 212450 ų |
| envelope_volume | 268410 ų |
| shell_volume | 54826 ų |
| envelope_diameter | 156.2 Å |
| shell_rg | 45.14 Å |
| envelope_rg | 41.86 Å |
| shape_rg | 42.18 Å |
| total_rg | 42.38 Å |
| total_atoms | 11883 |
| n_residues | 1479 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 145.2 Å |
| rg_real | 42.36 Å |
| rg_real_error | 1.40 Å |
| i0_real | 3.9830e+08 |
| i0_real_error | 7.5990e+06 |
| rg_reciprocal | 42.12 Å |
| i0_reciprocal | 398200000.0000 |
| total_estimate | 0.8436 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 39.2 Å |
| skewness | 0.482 |
| kurtosis | -0.394 |
| angular_range | — – 0.1850 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 54590000.0000 |
| n_real_points | 38 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.755; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.917; Smooth: 0.781 |