Crystal structure of chimeric anti-Z-DNA Fab cZ22-Fab

entry_id	9wrn
deposition_date	2025-09-12
title	Crystal structure of chimeric anti-Z-DNA Fab cZ22-Fab
keywords	Antibody, IMMUNE SYSTEM; IMMUNE SYSTEM
method	X-RAY DIFFRACTION

rg_guinier	42.85 Å
rg_electron	42.39 Å
i0	533938000.00
molecular_weight	186540.0 kDa
excluded_volume	232240 ų
envelope_volume	330790 ų
shell_volume	66318 ų
envelope_diameter	150.0 Å
shell_rg	47.11 Å
envelope_rg	40.72 Å
shape_rg	42.40 Å
total_rg	42.62 Å
total_atoms	13123
n_residues	1706
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	139.3 Å
rg_real	42.77 Å
rg_real_error	1.11 Å
i0_real	5.3390e+08
i0_real_error	9.2590e+06
rg_reciprocal	42.85 Å
i0_reciprocal	534000000.0000
total_estimate	0.8773
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	52.7 Å
skewness	0.288
kurtosis	-0.284
angular_range	— – 0.1850 Å−1
current_alpha	0.0000
highest_alpha	28650000.0000
n_real_points	38
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.872; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.990; Smooth: 0.794

Unit Cell

length_a	74.016 Å
length_b	87.025 Å
length_c	149.400 Å
angle_alpha	90.00 °
angle_beta	95.47 °
angle_gamma	90.00 °
z_pdb	8

Symmetry

space_group	P 1 21 1
int_tables_number	4
crystal_system	monoclinic

Refinement

resolution	2.150 Å
resolution_low	18.020 Å
r_factor	0.1945
r_work	0.1923
r_free	0.2376

Diffraction

temperature

110.0 K

Files (7)

• pr_distribution /app/data/pr_computation/wr/9wrn/pr_distribution.json
• pr_output /app/data/pr_computation/wr/9wrn/9wrn.pr.out
• pr_plot /app/data/visualization/pr_computation/wr/9wrn/9wrn_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/wr/9wrn/9wrn.dat
• saxs_fit /app/data/saxs_computation/wr/9wrn/9wrn.fit
• saxs_log /app/data/saxs_computation/wr/9wrn/9wrn.log
• saxs_plot /app/data/visualization/saxs_computation/wr/9wrn/9wrn_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/wr/9wrn/9wrn.fit
pddf	/app/data/pr_computation/wr/9wrn/9wrn.pr.out
profile	/app/data/saxs_computation/wr/9wrn/9wrn.dat