9xhn
Crystal structure of the C-terminal domain of AcvB from Agrobacterium tumefaciens
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9xhn |
| deposition_date | 2025-11-01 |
| title | Crystal structure of the C-terminal domain of AcvB from Agrobacterium tumefaciens |
| keywords | Lysyl-phosphatidylglycerol hydrolase, HYDROLASE; HYDROLASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 30.27 Å |
| rg_electron | 29.14 Å |
| i0 | 118596000.00 |
| molecular_weight | 88412.0 kDa |
| excluded_volume | 111640 ų |
| envelope_volume | 136770 ų |
| shell_volume | 37532 ų |
| envelope_diameter | 94.8 Å |
| shell_rg | 37.85 Å |
| envelope_rg | 28.86 Å |
| shape_rg | 29.09 Å |
| total_rg | 30.11 Å |
| total_atoms | 6233 |
| n_residues | 814 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 102.1 Å |
| rg_real | 30.12 Å |
| rg_real_error | 0.75 Å |
| i0_real | 1.1860e+08 |
| i0_real_error | 1.8000e+06 |
| rg_reciprocal | 30.18 Å |
| i0_reciprocal | 118600000.0000 |
| total_estimate | 0.8043 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 3 |
| r_peak_primary | 43.2 Å |
| skewness | 0.089 |
| kurtosis | -0.685 |
| angular_range | — – 0.2600 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 221000000.0000 |
| n_real_points | 53 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.821; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.989; Smooth: 0.000 |