9xv9
Crystal structure of single-strand DNA-stabilized Ag16 nanocluster: T5 linker
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9xv9 |
| deposition_date | 2025-11-26 |
| last_revision | 2026-01-28 |
| title | Crystal structure of single-strand DNA-stabilized Ag16 nanocluster: T5 linker |
| keywords | DNA, silver, nanocluster, emitter; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 16.07 Å |
| rg_electron | 16.06 Å |
| i0 | 15360200.00 |
| molecular_weight | 16352.0 kDa |
| excluded_volume | 13670 ų |
| envelope_volume | 16893 ų |
| shell_volume | 9795 ų |
| envelope_diameter | 53.9 Å |
| shell_rg | 19.91 Å |
| envelope_rg | 16.09 Å |
| shape_rg | 16.15 Å |
| total_rg | 16.27 Å |
| total_atoms | 882 |
| n_residues | 42 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 52.8 Å |
| rg_real | 16.23 Å |
| rg_real_error | 0.48 Å |
| i0_real | 1.5360e+07 |
| i0_real_error | 1.9600e+05 |
| rg_reciprocal | 16.22 Å |
| i0_reciprocal | 15360000.0000 |
| total_estimate | 0.6410 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 3 |
| r_peak_primary | 11.4 Å |
| skewness | 0.299 |
| kurtosis | -0.915 |
| angular_range | — – 0.4950 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 84000.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.607; Stabil: 0.999; Sysdev: 0.424; Positv: 1.000; Valcen: 0.278; Smooth: 0.961 |