9y3c
;[21-7B nWC] 21 bp tensegrity triangle with one set of Watson-Crick sticky ends, one of non-Watson-Crick sticky ends, and one of blunt ends ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9y3c |
| deposition_date | 2025-09-02 |
| title | ;[21-7B nWC] 21 bp tensegrity triangle with one set of Watson-Crick sticky ends, one of non-Watson-Crick sticky ends, and one of blunt ends ; |
| keywords | dna, tensegrity triangle, stacking, blunt; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 26.52 Å |
| rg_electron | 26.16 Å |
| i0 | 67371600.00 |
| molecular_weight | 38676.0 kDa |
| excluded_volume | 37345 ų |
| envelope_volume | 62512 ų |
| shell_volume | 21320 ų |
| envelope_diameter | 84.6 Å |
| shell_rg | 31.27 Å |
| envelope_rg | 25.87 Å |
| shape_rg | 26.13 Å |
| total_rg | 26.61 Å |
| total_atoms | 2565 |
| n_residues | 126 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 82.2 Å |
| rg_real | 26.44 Å |
| rg_real_error | 0.65 Å |
| i0_real | 6.7370e+07 |
| i0_real_error | 9.5710e+05 |
| rg_reciprocal | 26.47 Å |
| i0_reciprocal | 67370000.0000 |
| total_estimate | 0.9156 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 1 |
| r_peak_primary | 30.1 Å |
| skewness | 0.137 |
| kurtosis | -0.645 |
| angular_range | — – 0.3000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1606000.0000 |
| n_real_points | 61 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.977; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.993; Smooth: 0.975 |