9ylx
Cryo-EM structure of the CbCash filament bound to cA4
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9ylx |
| deposition_date | 2025-10-09 |
| title | Cryo-EM structure of the CbCash filament bound to cA4 |
| keywords | tRNA endonuclease, cA4 activation, CRISPR associated Schlafen, Csx15, RNA BINDING PROTEIN; RNA BINDING PROTEIN |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 47.37 Å |
| rg_electron | 46.57 Å |
| i0 | 1075350000.00 |
| molecular_weight | 270030.0 kDa |
| excluded_volume | 337490 ų |
| envelope_volume | 486240 ų |
| shell_volume | 83095 ų |
| envelope_diameter | 147.3 Å |
| shell_rg | 54.80 Å |
| envelope_rg | 45.35 Å |
| shape_rg | 46.57 Å |
| total_rg | 46.85 Å |
| total_atoms | 18958 |
| n_residues | 2365 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 146.6 Å |
| rg_real | 47.11 Å |
| rg_real_error | 1.09 Å |
| i0_real | 1.0750e+09 |
| i0_real_error | 1.8160e+07 |
| rg_reciprocal | 47.37 Å |
| i0_reciprocal | 1076000000.0000 |
| total_estimate | 0.8963 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 57.8 Å |
| skewness | 0.069 |
| kurtosis | -0.717 |
| angular_range | — – 0.1650 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 158300000.0000 |
| n_real_points | 34 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.952; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.987; Smooth: 0.805 |