9z8j
Gelatinamin A: a figure-of-eight lasso peptide
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9z8j |
| deposition_date | 2025-11-18 |
| last_revision | 2026-05-27 |
| title | Gelatinamin A: a figure-of-eight lasso peptide |
| keywords | Lasso peptide, Antimycobacterial, Mechanically Interlocked Peptide, ANTIBIOTIC; ANTIBIOTIC |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 6.11 Å |
| rg_electron | 7.13 Å |
| i0 | 18365300.00 |
| molecular_weight | 35023.0 kDa |
| excluded_volume | 44281 ų |
| envelope_volume | 5262 ų |
| shell_volume | 5433 ų |
| envelope_diameter | 29.4 Å |
| shell_rg | 13.70 Å |
| envelope_rg | 9.38 Å |
| shape_rg | 7.02 Å |
| total_rg | 7.86 Å |
| total_atoms | 5220 |
| n_residues | 340 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 18.6 Å |
| rg_real | 5.98 Å |
| rg_real_error | 0.03 Å |
| i0_real | 1.8140e+07 |
| i0_real_error | 1.1930e+05 |
| rg_reciprocal | 6.18 Å |
| i0_reciprocal | 18370000.0000 |
| total_estimate | 0.7120 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 1 |
| r_peak_primary | 7.3 Å |
| skewness | 0.241 |
| kurtosis | -0.418 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 3.2900 |
| highest_alpha | 793.3000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.979; Stabil: 0.921; Sysdev: 0.000; Positv: 1.000; Valcen: 0.982; Smooth: 0.576 |