Current Protein Identity:A0A6A5Q1H1 New Search
Main Difference Dimensions in This Set
Different construct Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
6XIQ Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress Deposited 2020-06-21 Assembly 1 Protein–RNA Heteromer;Protein × 75 PDB declaration: 82-meric(82) Consistent with all polymers
Chain y 1–200(200 aa)
Not recorded ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.20 Å
6XIR Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress Deposited 2020-06-21 Assembly 1 Protein–RNA Heteromer;Protein × 70 PDB declaration: 76-meric(76) Consistent with all polymers
Chain y 1–200(200 aa)
Not recorded ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.20 Å
7OSA Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands Deposited 2021-06-08 Assembly 1 Protein–RNA Heteromer;Protein × 77 PDB declaration: 83-meric(83) Consistent with all polymers
Chain eS8 1–200(200 aa)
Not recorded MG MAGNESIUM ION × 490 ZN ZINC ION × 8 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;PEG10K, KSCN, TRIS-HAC
Resolution 3.00 Å R-free 0.250
7OSM Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands Deposited 2021-06-09 Assembly 1 Protein–RNA Heteromer;Protein × 76 PDB declaration: 83-meric(83) Consistent with all polymers
Chain eS8 1–200(200 aa)
Not recorded MG MAGNESIUM ION × 499 ZN ZINC ION × 8 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;PEG 6000, KSCN, Tris-HAc
Resolution 3.00 Å R-free 0.284
7RR5 Structure of ribosomal complex bound with Rbg1/Tma46 Deposited 2021-08-09 Assembly 1 Protein–RNA Heteromer;Protein × 80 PDB declaration: 87-meric(87) Consistent with all polymers
Chain SI 1–200(200 aa)
Not recorded MG MAGNESIUM ION × 286 ASP ASPARTIC ACID × 1 ZN ZINC ION × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.23 Å
7ZPQ Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1) Deposited 2022-04-28 Assembly 1 Protein–RNA Heteromer;Protein × 77 PDB declaration: 82-meric(82) Consistent with all polymers
Chain AI 1–200(200 aa)
Not recorded MG MAGNESIUM ION × 86 ZN ZINC ION × 9 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.47 Å
8UTI Eukaryotic 80S ribosome with Reh1 and A/P site tRNA Deposited 2023-10-31 Assembly 1 Protein–RNA Heteromer;Protein × 75 PDB declaration: 82-meric(82) Consistent with all polymers
Chain SV 2–199(198 aa)
Not recorded 3HE 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.13 Å