Current Protein Identity:D6QLY0 New Search
Main Difference Dimensions in This Set
Different mutation/modification Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
5NUP Structural basis for maintenance of bacterial outer membrane lipid asymmetry Deposited 2017-05-01 Assembly 1 Protein heterocomplex Heteromer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count
Chain A 22–365(344 aa)
Chain B 22–365(344 aa)
Chain C 22–365(344 aa)
Not recorded C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE × 19 LMT DODECYL-BETA-D-MALTOSIDE × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;295 K;0.04 M magnesium chloride hexahydrate, 0.05 M sodium chloride, 0.1 M HEPES pH7.5 and 32 % PEG400
Resolution 2.90 Å R-free 0.290
5O79 Klebsiella pneumoniae OmpK36 Deposited 2017-06-08 Assembly 1 Protein homooligomer Homooligomer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 22–365(344 aa)
Chain B 22–365(344 aa)
Chain C 22–365(344 aa)
Not recorded C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE × 9 MG MAGNESIUM ION × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 6;295 K;0.08 M Magnesium Acetate tetrahydrate , 0.1 M sodium citrate, 14% w/v 5000 PEG MME
Resolution 1.65 Å R-free 0.190
6RD3 Crystal structure of the wild type OmpK36 from Klebsiella pneumonia Deposited 2019-04-12 Assembly 1 Protein homooligomer Homooligomer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 22–365(344 aa)
Chain B 22–365(344 aa)
Chain C 22–365(344 aa)
Mutation:G0 Mutation:G0 Mutation:G0 C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE × 17 MG MAGNESIUM ION × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;0.1M Lithium sulfate, 0.1M sodium citrate pH 5.6 and 12% PEG4000
Resolution 1.98 Å R-free 0.234
6RD3 Crystal structure of the wild type OmpK36 from Klebsiella pneumonia Deposited 2019-04-12 Assembly 2 Protein homooligomer Homooligomer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain D 22–365(344 aa)
Chain E 22–365(344 aa)
Chain F 22–365(344 aa)
Mutation:G0 Mutation:G0 Mutation:G0 C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE × 12 MG MAGNESIUM ION × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;293 K;0.1M Lithium sulfate, 0.1M sodium citrate pH 5.6 and 12% PEG4000
Resolution 1.98 Å R-free 0.234
7PZF Crystal structure of the OmpK36 TD insertion chimera from Klebsiella pneumonia Deposited 2021-10-12 Assembly 1 Protein homooligomer Homooligomer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 22–365(344 aa)
Chain B 22–365(344 aa)
Chain C 22–365(344 aa)
Mutation:T115 and D116 insertion Mutation:T115 and D116 insertion Mutation:T115 and D116 insertion LI LITHIUM ION × 3 C14 TETRADECANE × 11 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 5.6;293 K;0.1 M Lithium sulfate, 0.1 M Sodium citrate, and 10% PEG 4000 (pH 5.6)
Resolution 1.50 Å R-free 0.205
7PZF Crystal structure of the OmpK36 TD insertion chimera from Klebsiella pneumonia Deposited 2021-10-12 Assembly 2 Protein homooligomer Homooligomer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain D 22–365(344 aa)
Chain E 22–365(344 aa)
Chain F 22–365(344 aa)
Mutation:T115 and D116 insertion Mutation:T115 and D116 insertion Mutation:T115 and D116 insertion LI LITHIUM ION × 6 C14 TETRADECANE × 10 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 5.6;293 K;0.1 M Lithium sulfate, 0.1 M Sodium citrate, and 10% PEG 4000 (pH 5.6)
Resolution 1.50 Å R-free 0.205
7Q3T Crystal structure of the OmpK36 D insertion chimera from Klebsiella pneumonia Deposited 2021-10-28 Assembly 1 Protein homooligomer Homooligomer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain A 22–365(344 aa)
Chain B 22–365(344 aa)
Chain C 22–365(344 aa)
Mutation:D115 insertion Mutation:D115 insertion Mutation:D115 insertion C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE × 28 LI LITHIUM ION × 6 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 5.6;293 K;0.1 M Lithium sulfate, 0.1 M Sodium citrate, and 10% PEG 4000 (pH 5.6)
Resolution 1.79 Å R-free 0.213
7Q3T Crystal structure of the OmpK36 D insertion chimera from Klebsiella pneumonia Deposited 2021-10-28 Assembly 2 Protein homooligomer Homooligomer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain D 22–365(344 aa)
Chain E 22–365(344 aa)
Chain F 22–365(344 aa)
Mutation:D115 insertion Mutation:D115 insertion Mutation:D115 insertion C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE × 19 LI LITHIUM ION × 6 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 5.6;293 K;0.1 M Lithium sulfate, 0.1 M Sodium citrate, and 10% PEG 4000 (pH 5.6)
Resolution 1.79 Å R-free 0.213
7SZI Cryo-EM structure of OmpK36-TraN mating pair stabilization proteins from carbapenem-resistant Klebsiella pneumoniae Deposited 2021-11-27 Assembly 1 Protein heterocomplex Heteromer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count
Chain A 22–365(344 aa)
Chain B 22–365(344 aa)
Chain C 22–365(344 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.8;SEC Buffer
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å