Current Protein Identity:O60667 New Search
Main Difference Dimensions in This Set
Different construct Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
7YSG Cryo-EM structure of human FcmR bound to sIgM Deposited 2022-08-12 Assembly 1 Other combination Heteromer;Protein × 16 PDB declaration: hexadecameric(16) Consistent with protein count
Chain R 18–124(107 aa)
Chain S 18–124(107 aa)
Chain U 18–124(107 aa)
Chain V 18–124(107 aa)
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 10 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.18 Å
7YTC Cryo-EM structure of human FcmR bound to IgM-Fc/J Deposited 2022-08-14 Assembly 1 Protein heterocomplex Heteromer;Protein × 12 PDB declaration: dodecameric(12) Consistent with protein count
Chain R 18–124(107 aa)
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 11 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.39 Å
7YTD Cryo-EM structure of four human FcmR bound to IgM-Fc/J Deposited 2022-08-14 Assembly 1 Protein heterocomplex Heteromer;Protein × 15 PDB declaration: pentadecameric(15) Consistent with protein count
Chain R 18–124(107 aa)
Chain S 18–124(107 aa)
Chain U 18–124(107 aa)
Chain V 18–124(107 aa)
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 10 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.71 Å
7YTE crystal structure of human FcmR-D1 bound to IgM C4-domain Deposited 2022-08-14 Assembly 1 Protein heterocomplex Heteromer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count
Chain C 18–124(107 aa)
Chain D 18–124(107 aa)
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;291 K;1:1 ratio of protein:reservoir solution containing 0.1 M Ammonium citrate tribasic (pH 7.0) and 12% (w/v) PEG 3,350
Resolution 3.00 Å R-free 0.269
8BPE 8:1 binding of FcMR on IgM pentameric core Deposited 2022-11-16 Assembly 1 Other combination Heteromer;Protein × 19 PDB declaration: nonadecameric(19) Consistent with protein count
Chain I 18–251(234 aa)
Chain M 18–251(234 aa)
Chain N 18–251(234 aa)
Chain O 18–251(234 aa)
Chain P 18–251(234 aa)
Chain Q 18–251(234 aa)
Chain R 18–251(234 aa)
Chain S 18–251(234 aa)
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 8 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.63 Å
8BPF FcMR binding at subunit Fcu1 of IgM pentamer Deposited 2022-11-16 Assembly 1 Other combination Heteromer;Protein × 12 PDB declaration: dodecameric(12) Consistent with protein count
Chain I 18–251(234 aa)
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 10 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.50 Å
8BPG FcMR binding at subunit Fcu3 of IgM pentamer Deposited 2022-11-16 Assembly 1 Other combination Heteromer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count
Chain A 18–251(234 aa)
Chain B 18–251(234 aa)
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å