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Protein Structures and Oligomeric States

Enter a protein name, UniProt accession or PDB ID. Name searches ask you to confirm the protein identity before related structures are queried.

Current Protein Identity：P00367 New Search
7PDB entries
7Biological assembly
42chain/assembly records
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
1L1F Structure of human glutamate dehydrogenase-apo form Deposited 2002-02-15 Assembly 1 Protein homooligomer Homooligomer；Protein × 6 PDB declaration: hexameric（6） Consistent with protein count
Chain A 54–558（505 aa）
Chain B 54–558（505 aa）
Chain C 54–558（505 aa）
Chain D 54–558（505 aa）
Chain E 54–558（505 aa）
Chain F 54–558（505 aa）
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；PEG 8000, NaCl, sodium phosphate, sodium azide, octyl-b-glucopyranoside, methyl pentanediol, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 2.70 Å R-free 0.302
1NR1 Crystal structure of the R463A mutant of human Glutamate dehydrogenase Deposited 2003-01-23 Assembly 1 Protein homooligomer Homooligomer；Protein × 6 PDB declaration: hexameric（6） Consistent with protein count
Chain A 63–558（496 aa）
Chain B 63–558（496 aa）
Chain C 63–558（496 aa）
Chain D 63–558（496 aa）
Chain E 63–558（496 aa）
Chain F 63–558（496 aa）
Mutation：R463A Mutation：R463A Mutation：R463A Mutation：R463A Mutation：R463A Mutation：R463A No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6.8；298 K；sodium phosphate, PEG 8000, BOG, sodium chloride, MPD, sodium azide, pH 6.8, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 3.30 Å R-free 0.284
6DQG Human glutamate dehydrogenase, H454Y mutant Deposited 2018-06-10 Assembly 1 Protein homooligomer Homooligomer；Protein × 6 PDB declaration: hexameric（6） Consistent with protein count
Chain A 63–558（496 aa） Fragment：UNP residues 63-558
Chain B 63–558（496 aa） Fragment：UNP residues 63-558
Chain C 63–558（496 aa） Fragment：UNP residues 63-558
Chain D 63–558（496 aa） Fragment：UNP residues 63-558
Chain E 63–558（496 aa） Fragment：UNP residues 63-558
Chain F 63–558（496 aa） Fragment：UNP residues 63-558
Mutation：H454Y Mutation：H454Y Mutation：H454Y Mutation：H454Y Mutation：H454Y Mutation：H454Y PO4 PHOSPHATE ION × 15 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6.8；295 K；Reservoir: 10% w/v PEG8000, 0.1 M sodium chloride, 1.3% w/v octyl-b-glucopyranoside, 7.5% v/v MPD, 0.1 M sodium phosphate, pH 6.8, 1 mM sodium azide
Resolution 2.70 Å R-free 0.279
7UZM Glutamate dehydrogenase 1 from human liver Deposited 2022-05-09 Assembly 1 Protein homooligomer Homooligomer；Protein × 6 PDB declaration: hexameric（6） Consistent with protein count
Chain A 1–558（558 aa）
Chain B 1–558（558 aa）
Chain C 1–558（558 aa）
Chain D 1–558（558 aa）
Chain E 1–558（558 aa）
Chain F 1–558（558 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.24 Å
8KGY Human glutamate dehydrogenase I Deposited 2023-08-20 Assembly 1 Protein homooligomer Homooligomer；Protein × 6 PDB declaration: hexameric（6） Consistent with protein count
Chain A 1–558（558 aa）
Chain B 1–558（558 aa）
Chain C 1–558（558 aa）
Chain D 1–558（558 aa）
Chain E 1–558（558 aa）
Chain F 1–558（558 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4；20 mM HEPES pH 7.4, 200 mM NaCl, 2 mM MgCl2 and 0.5 mM TCEP
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.59 Å
8SK8 human liver mitochondrial Glutamate dehydrogenase 1 Deposited 2023-04-18 Assembly 1 Protein homooligomer Homooligomer；Protein × 6 PDB declaration: hexameric（6） Consistent with protein count
Chain A 1–558（558 aa）
Chain B 1–558（558 aa）
Chain C 1–558（558 aa）
Chain D 1–558（558 aa）
Chain E 1–558（558 aa）
Chain F 1–558（558 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.31 Å
8W4J Cryo-EM structure of the KLHL22 E3 ligase bound to human glutamate dehydrogenase I Deposited 2023-08-24 Assembly 1 Protein heterocomplex Heteromer；Protein × 8 PDB declaration: octameric（8） Consistent with protein count
Chain A 1–558（558 aa）
Chain B 1–558（558 aa）
Chain C 1–558（558 aa）
Chain D 1–558（558 aa）
Chain E 1–558（558 aa）
Chain F 1–558（558 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.06 Å

This page presents structural evidence recorded in PDB/mmCIF.“No recorded non-water small molecule” does not prove that the experimental sample was ligand-free; experimental conditions belong to the PDB experiment, while ligands and copy counts are shown for each biological assembly.