Current Protein Identity:P0AFW8 New Search
Main Difference Dimensions in This Set
Different construct Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
1SG5 Solution structure of Yaeo, a Rho-specific inhibitor of transcription termination Deposited 2004-02-23 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–84(84 aa)
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 7;303 K;Pressure ambient
NMR sample composition 2mM YaeO, 150mM phophate buffer, 2.0mM DTT; 0.1 mM NaN3,90% H2O, 10% D2O | 90% H2O/10% D2O
NMR sample composition 2mM YaeO,U-15N, 150mM phophate buffer, 2.0mM DTT; 0.1 mM NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O
NMR sample composition 2mM YaeO,U-15N, 13C, 150mM phophate buffer, 2.0mM DTT; 0.1 mM NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O
NMR sample composition 2mM YaeO, 150mM phophate buffer, 2.0mM DTT; 0.1 mM NaN3, 100% D20 | 100% D20
Resolution not provided
8PTM Structure of the transcription termination factor Rho in complex with Rof and ADP Deposited 2023-07-14 Assembly 1 Protein heterocomplex Heteromer;Protein × 11 PDB declaration: 11-meric(11) Consistent with protein count
Chain a 2–84(83 aa)
Chain b 2–84(83 aa)
Chain c 2–84(83 aa)
Chain d 2–84(83 aa)
Chain e 2–84(83 aa)
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 3 MG MAGNESIUM ION × 2 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen NITROGEN
Resolution 2.90 Å
8PTN Structure of the transcription termination factor Rho in complex with Rof Deposited 2023-07-14 Assembly 1 Protein heterocomplex Heteromer;Protein × 11 PDB declaration: undecameric(11) Consistent with protein count
Chain a 2–84(83 aa)
Chain b 2–84(83 aa)
Chain c 2–84(83 aa)
Chain d 2–84(83 aa)
Chain e 2–84(83 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen NITROGEN
Resolution 3.30 Å
8PTO Structure of Rho pentamer in complex with Rof and ADP Deposited 2023-07-14 Assembly 1 Protein heterocomplex Heteromer;Protein × 9 PDB declaration: nonameric(9) Consistent with protein count
Chain a 2–84(83 aa)
Chain b 2–84(83 aa)
Chain c 2–84(83 aa)
Chain d 2–84(83 aa)
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen NITROGEN
Resolution 2.70 Å
8PTP Structure of Rho pentamer in complex with Rof Deposited 2023-07-14 Assembly 1 Protein heterocomplex Heteromer;Protein × 9 PDB declaration: nonameric(9) Consistent with protein count
Chain a 2–84(83 aa)
Chain b 2–84(83 aa)
Chain c 2–84(83 aa)
Chain d 2–84(83 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 8
cryo-EM vitrification conditions Cryogen NITROGEN
Resolution 3.00 Å
8W8D Structural mechanism of inhibition of the Rho transcription termination factor by Rof Deposited 2023-09-01 Assembly 1 Protein heterocomplex Heteromer;Protein × 12 PDB declaration: 12-meric(12) Consistent with protein count
Chain a 1–84(84 aa)
Chain b 1–84(84 aa)
Chain c 1–84(84 aa)
Chain d 1–84(84 aa)
Chain e 1–84(84 aa)
Chain f 1–84(84 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.6
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å