当前蛋白身份:P13612
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差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。
相关结构差异明细
一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。
| PDB 条目 | Assembly / 聚集状态 | 构建体 | 突变与修饰 | 配体、离子与非聚合物 | 实验方法 | 实验环境 | 结构质量 |
|---|---|---|---|---|---|---|---|
| 3V4P crystal structure of a4b7 headpiece complexed with Fab ACT-1 提交 2011-12-15 | Assembly 1 其他组合 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 A
34–620(587 aa)
片段:unp residues 34-620
|
突变:R558A | CA CALCIUM ION × 5 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 5 15P POLYETHYLENE GLYCOL (N=34) × 1 MG MAGNESIUM ION × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;277 K;0.1 M Tris, 0.1 M NaCl, 8-10% PEG 20,000, VAPOR DIFFUSION, HANGING DROP, temperature 277K, pH 8.5
|
分辨率 3.15 Å R-free 0.251 |
| 3V4P crystal structure of a4b7 headpiece complexed with Fab ACT-1 提交 2011-12-15 | Assembly 2 其他组合 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 C
34–620(587 aa)
片段:unp residues 34-620
|
突变:R558A | CA CALCIUM ION × 5 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4 MG MAGNESIUM ION × 1 TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;277 K;0.1 M Tris, 0.1 M NaCl, 8-10% PEG 20,000, VAPOR DIFFUSION, HANGING DROP, temperature 277K, pH 8.5
|
分辨率 3.15 Å R-free 0.251 |
| 3V4V crystal structure of a4b7 headpiece complexed with Fab ACT-1 and RO0505376 提交 2011-12-15 | Assembly 1 其他组合 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 A
34–620(587 aa)
片段:unp residues 34-620
|
突变:R558A | CA CALCIUM ION × 5 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 6 TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL × 1 MG MAGNESIUM ION × 1 0DU N-(2,6-dichlorobenzoyl)-4-[1,6-dimethyl-2-oxo-4-(trifluoromethyl)-1,2-dihydropyridin-3-yl]-L-phenylalanine × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;277 K;0.1 M Tris pH 8.5, 0.1 M NaCl, 8-10% PEG 20,000, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
分辨率 3.10 Å R-free 0.231 |
| 3V4V crystal structure of a4b7 headpiece complexed with Fab ACT-1 and RO0505376 提交 2011-12-15 | Assembly 2 其他组合 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 C
34–620(587 aa)
片段:unp residues 34-620
|
突变:R558A | CA CALCIUM ION × 5 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 5 MG MAGNESIUM ION × 1 0DU N-(2,6-dichlorobenzoyl)-4-[1,6-dimethyl-2-oxo-4-(trifluoromethyl)-1,2-dihydropyridin-3-yl]-L-phenylalanine × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;277 K;0.1 M Tris pH 8.5, 0.1 M NaCl, 8-10% PEG 20,000, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
分辨率 3.10 Å R-free 0.231 |
| 4HKC 14-3-3-zeta in complex with S1011 phosphorylated integrin alpha-4 peptide 提交 2012-10-15 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 B
1003–1032(30 aa)
片段:UNP residues 1003-1032
|
非标准单体:是(mmCIF未提供具体位点) | GOL GLYCEROL × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7.5;277 K;0.1M Na HEPES (pH 7.5), 25% PEG 2000 MME, VAPOR DIFFUSION, SITTING DROP, temperature 277K
|
分辨率 2.20 Å R-free 0.239 |
| 5C7Z AP2 Mu2 adaptin C-terminal domain complexed with integrin alpha-4 peptide 提交 2015-06-25 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 B
1008–1015(8 aa)
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 7.1;293 K;2.2M NaCl, 0.4M Na/K phosphate, 10MM DTT 0.1M MES pH 7.1, 15% glycerol, molar ratio of peptide to protein 3:1
|
分辨率 2.77 Å R-free 0.224 |
| 9P95 CryoEM structure of integrin alpha4beta7 bound to MAdCAM-1 提交 2025-06-24 | Assembly 1 其他组合 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致 |
链 A
1–970(970 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 CA CALCIUM ION × 3 MN MANGANESE (II) ION × 3 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.4;0.05% CHAPS added immediately before vitrification
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.05 Å |
| 9P96 CryoEM structure of the apo integrin alpha4beta7 提交 2025-06-24 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
1–970(970 aa)
|
未记录 | CA CALCIUM ION × 6 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.4
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 3.10 Å |