Current Protein Identity:P41697 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
3OKQ Crystal structure of a core domain of yeast actin nucleation cofactor Bud6 Deposited 2010-08-25 Assembly 1 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 549–688(140 aa) Fragment:coiled-coil domain (unp residues 549-688)
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;12% PEG 3350, 175 mM sodium malonate (pH 7.0), 20% glycerol, 5 mM DTT, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 2.04 Å R-free 0.227
3ONX Crystal structure of a domain of a protein involved in formation of actin cytoskeleton Deposited 2010-08-30 Assembly 1 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 549–688(140 aa) Fragment:coiled-coil domain (unp residues 549-688)
Chain B 549–688(140 aa) Fragment:coiled-coil domain (unp residues 549-688)
Non-standard monomer:Yes (specific site not provided by mmCIF) Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7;293 K;9% PEG 3350, 85 mM sodium malonate (pH 7.0), 25% glycerol, 10 mM DTT, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 2.90 Å R-free 0.278
4WYB Structure of the Bud6 flank domain in complex with actin Deposited 2014-11-17 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 699–788(90 aa) Fragment:residues 699-788
Not recorded ATP ADENOSINE-5'-TRIPHOSPHATE × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;298 K;3.5M sodium formate, 0.1M CaCl2, and 5 mM TCEP
Resolution 3.49 Å R-free 0.258
4WYB Structure of the Bud6 flank domain in complex with actin Deposited 2014-11-17 Assembly 10 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain T 699–788(90 aa) Fragment:residues 699-788
Not recorded ATP ADENOSINE-5'-TRIPHOSPHATE × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;298 K;3.5M sodium formate, 0.1M CaCl2, and 5 mM TCEP
Resolution 3.49 Å R-free 0.258
4WYB Structure of the Bud6 flank domain in complex with actin Deposited 2014-11-17 Assembly 11 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain V 699–788(90 aa) Fragment:residues 699-788
Not recorded ATP ADENOSINE-5'-TRIPHOSPHATE × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;298 K;3.5M sodium formate, 0.1M CaCl2, and 5 mM TCEP
Resolution 3.49 Å R-free 0.258
4WYB Structure of the Bud6 flank domain in complex with actin Deposited 2014-11-17 Assembly 12 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain Y 699–788(90 aa) Fragment:residues 699-788
Not recorded ATP ADENOSINE-5'-TRIPHOSPHATE × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;298 K;3.5M sodium formate, 0.1M CaCl2, and 5 mM TCEP
Resolution 3.49 Å R-free 0.258
4WYB Structure of the Bud6 flank domain in complex with actin Deposited 2014-11-17 Assembly 2 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain D 699–788(90 aa) Fragment:residues 699-788
Not recorded ATP ADENOSINE-5'-TRIPHOSPHATE × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;298 K;3.5M sodium formate, 0.1M CaCl2, and 5 mM TCEP
Resolution 3.49 Å R-free 0.258
4WYB Structure of the Bud6 flank domain in complex with actin Deposited 2014-11-17 Assembly 3 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain F 699–788(90 aa) Fragment:residues 699-788
Not recorded ATP ADENOSINE-5'-TRIPHOSPHATE × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;298 K;3.5M sodium formate, 0.1M CaCl2, and 5 mM TCEP
Resolution 3.49 Å R-free 0.258
4WYB Structure of the Bud6 flank domain in complex with actin Deposited 2014-11-17 Assembly 4 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain H 699–788(90 aa) Fragment:residues 699-788
Not recorded ATP ADENOSINE-5'-TRIPHOSPHATE × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;298 K;3.5M sodium formate, 0.1M CaCl2, and 5 mM TCEP
Resolution 3.49 Å R-free 0.258
4WYB Structure of the Bud6 flank domain in complex with actin Deposited 2014-11-17 Assembly 5 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain J 699–788(90 aa) Fragment:residues 699-788
Not recorded ATP ADENOSINE-5'-TRIPHOSPHATE × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;298 K;3.5M sodium formate, 0.1M CaCl2, and 5 mM TCEP
Resolution 3.49 Å R-free 0.258
4WYB Structure of the Bud6 flank domain in complex with actin Deposited 2014-11-17 Assembly 6 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain L 699–788(90 aa) Fragment:residues 699-788
Not recorded ATP ADENOSINE-5'-TRIPHOSPHATE × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;298 K;3.5M sodium formate, 0.1M CaCl2, and 5 mM TCEP
Resolution 3.49 Å R-free 0.258
4WYB Structure of the Bud6 flank domain in complex with actin Deposited 2014-11-17 Assembly 7 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain N 699–788(90 aa) Fragment:residues 699-788
Not recorded ATP ADENOSINE-5'-TRIPHOSPHATE × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;298 K;3.5M sodium formate, 0.1M CaCl2, and 5 mM TCEP
Resolution 3.49 Å R-free 0.258
4WYB Structure of the Bud6 flank domain in complex with actin Deposited 2014-11-17 Assembly 8 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain P 699–788(90 aa) Fragment:residues 699-788
Not recorded ATP ADENOSINE-5'-TRIPHOSPHATE × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;298 K;3.5M sodium formate, 0.1M CaCl2, and 5 mM TCEP
Resolution 3.49 Å R-free 0.258
4WYB Structure of the Bud6 flank domain in complex with actin Deposited 2014-11-17 Assembly 9 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain R 699–788(90 aa) Fragment:residues 699-788
Not recorded ATP ADENOSINE-5'-TRIPHOSPHATE × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;298 K;3.5M sodium formate, 0.1M CaCl2, and 5 mM TCEP
Resolution 3.49 Å R-free 0.258