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Protein Structures and Oligomeric States

Enter a protein name, UniProt accession or PDB ID. Name searches ask you to confirm the protein identity before related structures are queried.

Current Protein Identity：P70206 New Search
5PDB entries
7Biological assembly
7chain/assembly records
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
3RYT The Plexin A1 intracellular region in complex with Rac1 Deposited 2011-05-11 Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 1269–1894（626 aa） Fragment：intracellular region (UNP residues 1269-1894)
Not recorded MG MAGNESIUM ION × 1 GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；15% PEG1500, 100 mM SPG buffer, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Resolution 3.58 Å R-free 0.340
3RYT The Plexin A1 intracellular region in complex with Rac1 Deposited 2011-05-11 Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count
Chain B 1269–1894（626 aa） Fragment：intracellular region (UNP residues 1269-1894)
Not recorded No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；15% PEG1500, 100 mM SPG buffer, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Resolution 3.58 Å R-free 0.340
5L56 Plexin A1 full extracellular region, domains 1 to 10, to 4 angstrom Deposited 2016-05-28 Assembly 1 Other combination Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 37–1236（1200 aa） Fragment：UNP residues 37-1236
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 8.5；293.5 K；6% (w/v) PEG 4k, 5 mM tricine or 5 mM TRIS
Resolution 4.00 Å R-free 0.308
5L59 Plexin A1 full extracellular region, domains 1 to 10, to 6 angstrom, spacegroup P2(1) Deposited 2016-05-28 Assembly 1 Other combination Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count
Chain A 37–1236（1200 aa） Fragment：UNP residues 37-1236
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；293.5 K；15% (v/v) propanol, 20 mM magnesium chloride 50 mM MES, pH 6.0
Resolution 6.00 Å R-free 0.299
5L59 Plexin A1 full extracellular region, domains 1 to 10, to 6 angstrom, spacegroup P2(1) Deposited 2016-05-28 Assembly 2 Other combination Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count
Chain B 37–1236（1200 aa） Fragment：UNP residues 37-1236
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；293.5 K；15% (v/v) propanol, 20 mM magnesium chloride 50 mM MES, pH 6.0
Resolution 6.00 Å R-free 0.299
5L5C Plexin A1 full extracellular region, domains 1 to 10, to 6 angstrom, spacegroup P4(3)2(1)2 Deposited 2016-05-28 Assembly 1 Other combination Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 37–1236（1200 aa） Fragment：UNP residues 37-1236
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 8.5；293.5 K；6% (w/v) PEG 4k, 5 mM tricine, pH 8.5
Resolution 6.00 Å R-free 0.316
5L7N Plexin A1 extracellular fragment, domains 7-10 (IPT3-IPT6) Deposited 2016-06-03 Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count
Chain A 861–1241（381 aa）
Not recorded NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 EDO 1,2-ETHANEDIOL × 1 PEG DI(HYDROXYETHYL)ETHER × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；293.5 K；25% (w/v) polyethylene glycol 3,350, 100mM BIS-TRIS pH 5.5 and 200mM potassium sodium tartrate
Resolution 2.20 Å R-free 0.270

This page presents structural evidence recorded in PDB/mmCIF.“No recorded non-water small molecule” does not prove that the experimental sample was ligand-free; experimental conditions belong to the PDB experiment, while ligands and copy counts are shown for each biological assembly.