Current Protein Identity:P83476 New Search
Main Difference Dimensions in This Set
Different mutation/modification Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
2N9T NMR solution structure of ProTx-II Deposited 2015-12-08 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–30(30 aa)
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions 298 K;Pressure ambient
NMR sample composition 2 mg protein, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition 2 mg protein, 100% D2O | 100% D2O
Resolution not provided
5O0U Crystal structure of tarantula venom peptide Protoxin-II Deposited 2017-05-17 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–30(30 aa)
Not recorded CL CHLORIDE ION × 2 EDO 1,2-ETHANEDIOL × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;293 K;2M lithium sulfate, 100 mM Tris-HCl (pH 8), 2% v/v PEG 400
Resolution 0.99 Å R-free 0.140
6MK4 Solution NMR structure of spider toxin analogue [E17K]ProTx-II Deposited 2018-09-25 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 1–30(30 aa)
Mutation:E17K No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions 298 K;Ionic strength (raw mmCIF value) 0;Pressure 1
NMR measurement conditions 298 K;Ionic strength (raw mmCIF value) 0;Pressure 1
NMR sample composition 2 mg/mL [E17K]ProTx-II, 90% H2O/10% D2O | 90% H2O/10% D2O
Resolution not provided
6N4I Structural basis of Nav1.7 inhibition by a gating-modifier spider toxin Deposited 2018-11-19 Assembly 1 Protein heterocomplex Heteromer;Protein × 8 PDB declaration: octameric(8) Consistent with protein count
Chain E 1–30(30 aa)
Chain F 1–30(30 aa)
Chain G 1–30(30 aa)
Chain H 1–30(30 aa)
Not recorded 6OU [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate × 16 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7;292 K;2.3-2.6M Ammonium sulfate, 100 mM HEPES, pH 7.0; 30% sucrose for cryo
Resolution 3.54 Å R-free 0.294
6N4Q CryoEM structure of Nav1.7 VSD2 (actived state) in complex with the gating modifier toxin ProTx2 Deposited 2018-11-20 Assembly 1 Insufficient information Heteromer;Protein × 12 PDB declaration: dodecameric(12) Consistent with protein count
Chain E 1–30(30 aa)
Chain F 1–30(30 aa)
Chain G 1–30(30 aa)
Chain H 1–30(30 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 8;10 mM Tris pH 8.0, 100 mM NaCl, 0.06% FA3, 0.1 mg/ml POPC:POPE:POPG mixed at molar ratio 3:1:1
cryo-EM vitrification conditions Cryogen ETHANE;Apply 3 uL, blot 2.5s. Ted Pella 595 filter paper.
Resolution 3.60 Å
6N4R CryoEM structure of Nav1.7 VSD2 (deactived state) in complex with the gating modifier toxin ProTx2 Deposited 2018-11-20 Assembly 1 Insufficient information Heteromer;Protein × 12 PDB declaration: dodecameric(12) Consistent with protein count
Chain E 1–30(30 aa)
Chain F 1–30(30 aa)
Chain G 1–30(30 aa)
Chain H 1–30(30 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 8;10 mM Tris pH 8.0, 100 mM NaCl, 0.06% FA3, 0.1 mg/ml POPC:POPE:POPG mixed at molar ratio 3:1:1
cryo-EM vitrification conditions Cryogen ETHANE;Apply 3 uL, blot 2.5s. Ted Pella 595 filter paper.
Resolution 4.20 Å