Current Protein Identity:Q02630 New Search
Main Difference Dimensions in This Set
Different mutation/modification Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
2AIV Multiple conformations in the ligand-binding site of the yeast nuclear pore targeting domain of NUP116P Deposited 2005-08-01 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 967–1113(147 aa) Fragment:C-terminal domain, residues 967-1113
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 6.5;293 K;Ionic strength (raw mmCIF value) 100mM sodium-potassium phosphate pH 6.5, 50mM NaCl, 1mM DTT;Pressure 1
NMR sample composition 0.5-1mM Nup116p U-15N,13C | 100mM sodium-potassium phosphate pH 6.5, 50mM NaCl, 1mM DTT, 90% H2O, 10% D2O
Resolution not provided
3PBP Structure of the yeast heterotrimeric Nup82-Nup159-Nup116 nucleoporin complex Deposited 2010-10-20 Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain B 967–1113(147 aa) Fragment:C-terminal domain (CTD), UNP residues 967-1113
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 6.6;298 K;PEG 400, sodium cacodylate, lithium sulfate, 2,5-hexanediol, pH 6.6, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 2.60 Å R-free 0.272
3PBP Structure of the yeast heterotrimeric Nup82-Nup159-Nup116 nucleoporin complex Deposited 2010-10-20 Assembly 2 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain E 967–1113(147 aa) Fragment:C-terminal domain (CTD), UNP residues 967-1113
Non-standard monomer:Yes (specific site not provided by mmCIF) PGE TRIETHYLENE GLYCOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 6.6;298 K;PEG 400, sodium cacodylate, lithium sulfate, 2,5-hexanediol, pH 6.6, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 2.60 Å R-free 0.272
3PBP Structure of the yeast heterotrimeric Nup82-Nup159-Nup116 nucleoporin complex Deposited 2010-10-20 Assembly 3 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain H 967–1113(147 aa) Fragment:C-terminal domain (CTD), UNP residues 967-1113
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 6.6;298 K;PEG 400, sodium cacodylate, lithium sulfate, 2,5-hexanediol, pH 6.6, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 2.60 Å R-free 0.272
3PBP Structure of the yeast heterotrimeric Nup82-Nup159-Nup116 nucleoporin complex Deposited 2010-10-20 Assembly 4 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count
Chain K 967–1113(147 aa) Fragment:C-terminal domain (CTD), UNP residues 967-1113
Non-standard monomer:Yes (specific site not provided by mmCIF) No recorded non-water small molecule X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 6.6;298 K;PEG 400, sodium cacodylate, lithium sulfate, 2,5-hexanediol, pH 6.6, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 2.60 Å R-free 0.272