Current Protein Identity:Q12476 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
2LLI Low resolution structure of RNA-binding subunit of the TRAMP complex Deposited 2011-11-10 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 57–180(124 aa) Fragment:UNP residues 57-180
Not recorded ZN ZINC ION × 5 SOLUTION NMR
NMR measurement conditions pH 8;293 K;Ionic strength (raw mmCIF value) 0.5;Pressure ambient
NMR sample composition 100 uM uM [U-99% 13C; U-99% 15N] protein_1, 90% H2O/10% D2O | 90% H2O/10% D2O
Resolution not provided
3NYB Structure and function of the polymerase core of TRAMP, a RNA surveillance complex Deposited 2010-07-14 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 118–198(81 aa) Fragment:fourth and fifth zinc knuckles of Air2p (UNP residues 118-198)
Not recorded ZN ZINC ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 5.8;277 K;100 mM sodium citrate at pH 5.8, 200 mM sodium acetate, 11% PEG 4000, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Resolution 2.70 Å R-free 0.258
4U4C The molecular architecture of the TRAMP complex reveals the organization and interplay of its two catalytic activities Deposited 2014-07-23 Assembly 1 Insufficient information Heteromer;Protein × 2 PDB declaration: Dimeric(2) Consistent with protein count
Chain B 1–62(62 aa) Fragment:UNP residues 1-62,UNP residues 111-160,UNP residues 1-62,UNP residues 111-160
Not recorded SO4 SULFATE ION × 7 EDO 1,2-ETHANEDIOL × 2 CL CHLORIDE ION × 2 PG4 TETRAETHYLENE GLYCOL × 2 PEG DI(HYDROXYETHYL)ETHER × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8.2;285.15 K;0.1 M Tris pH 8.2, 0.15 M Li2SO4, 32% PEG 400
Resolution 2.40 Å R-free 0.240