Current Protein Identity:Q2T9T3 New Search
Main Difference Dimensions in This Set
Different assembly state Different ligand/ion Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
5FLM Structure of transcribing mammalian RNA polymerase II Deposited 2015-10-26 Assembly 1 Other combination Heteromer;Protein × 12 PDB declaration: pentadecameric(15) Consistent with all polymers
Chain E 1–210(210 aa)
Not recorded ZN ZINC ION × 8 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer 150 MM NACL, 5 MM HEPES, 0.01 MM ZNCL2, 10 MM DTT;pH 7.25;150 MM NACL, 5 MM HEPES, 0.01 MM ZNCL2, 10 MM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
5OIK Structure of an RNA polymerase II-DSIF transcription elongation complex Deposited 2017-07-18 Assembly 1 Other combination Heteromer;Protein × 14 PDB declaration: heptadecameric(17) Consistent with all polymers
Chain E 1–210(210 aa)
Not recorded ZN ZINC ION × 8 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.25;pH was adjusted at 25 degrees Celsius
cryo-EM vitrification conditions Cryogen ETHANE;Sample (four microliters) was applied to glow-discharged Quantifoil R 2/1 holey carbon grids, which were then blotted for 8.5s and plunge-frozen in liquid ethane.
Resolution 3.70 Å
8QQ2 RNAPII elongation complex bound to RECQ5 Deposited 2023-10-03 Assembly 1 Other combination Heteromer;Protein × 13 PDB declaration: hexadecameric(16) Consistent with all polymers
Chain E 1–210(210 aa)
Not recorded ZN ZINC ION × 8 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE-PROPANE
Resolution 4.20 Å
8QW8 In condensate RNAPII elongation complex bound to RECQ5 Deposited 2023-10-19 Assembly 1 Other combination Heteromer;Protein × 13 PDB declaration: hexadecameric(16) Consistent with all polymers
Chain E 1–210(210 aa)
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE-PROPANE
Resolution 7.70 Å
8QW9 RNAPII elongation complex bound to RECQ5_R502E Deposited 2023-10-19 Assembly 1 Other combination Heteromer;Protein × 13 PDB declaration: hexadecameric(16) Consistent with all polymers
Chain E 1–210(210 aa)
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE-PROPANE
Resolution 4.30 Å
9XGK Structure of mammalian RNA polymerase II stalled by Actinomycin D at the N-1 position. Deposited 2025-10-30 Assembly 1 Other combination Heteromer;Protein × 13 PDB declaration: hexadecameric(16) Consistent with all polymers
Chain E 1–210(210 aa)
Not recorded ZN ZINC ION × 8 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.53 Å