Current Protein Identity:Q4TT38 New Search
Main Difference Dimensions in This Set
Different assembly state Different ligand/ion Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
3J7Y Structure of the large ribosomal subunit from human mitochondria Deposited 2014-08-26 Assembly 1 Protein–RNA Heteromer;Protein × 49 PDB declaration: 51-meric(51) Consistent with all polymers
Chain X 1–256(256 aa)
Not recorded AMP ADENOSINE MONOPHOSPHATE × 1 MG MAGNESIUM ION × 66 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer 20 mM HEPES-KOH, pH 7.45, 100 mM potassium chloride, 20 mM magnesium acetate, 2 mM DTT;pH 7.45;20 mM HEPES-KOH, pH 7.45, 100 mM potassium chloride, 20 mM magnesium acetate, 2 mM DTT
cryo-EM vitrification conditions 90 K;Cryogen ETHANE;Blot 2.5 seconds before plunging into liquid ethane (FEI VITROBOT MARK II).
Resolution 3.40 Å
3J9M Structure of the human mitochondrial ribosome (class 1) Deposited 2015-02-08 Assembly 1 Protein–RNA Heteromer;Protein × 81 PDB declaration: 85-meric(85) Consistent with all polymers
Chain X 1–256(256 aa)
Not recorded MG MAGNESIUM ION × 127 ZN ZINC ION × 7 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer 20 mM HEPES-KOH, pH 7.45, 100 mM KCl, 20 mM MgOAc, 2 mM DTT;pH 7.45;20 mM HEPES-KOH, pH 7.45, 100 mM KCl, 20 mM MgOAc, 2 mM DTT
cryo-EM vitrification conditions Blot 2.5 seconds before plunging;90 K;Cryogen ETHANE;Blot 2.5 seconds before plunging into liquid ethane (FEI VITROBOT MARK II).
Resolution 3.50 Å