Current Protein Identity:Q6LDG3 New Search
Main Difference Dimensions in This Set
Different mutation/modification Different assembly state Different ligand/ion Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
3SG2 Crystal Structure of GCaMP2-T116V,D381Y Deposited 2011-06-14 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 37–55(19 aa) Fragment:SEE REMARK 999
Mutation:T116V,D381Y Non-standard monomer:Yes (specific site not provided by mmCIF) CA CALCIUM ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.2 M ammonium acetate, 0.1 M Tris, pH 8.5, 25% PEG3350, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Resolution 2.00 Å R-free 0.207
3SG3 Crystal Structure of GCaMP3-D380Y Deposited 2011-06-14 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 37–55(19 aa) Fragment:SEE REMARK 999
Mutation:D380Y Non-standard monomer:Yes (specific site not provided by mmCIF) CA CALCIUM ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.2 M sodium chloride, 0.1 M Tris, pH 8.5, 25% PEG3350, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Resolution 2.10 Å R-free 0.199
3SG4 Crystal Structure of GCaMP3-D380Y, LP(linker 2) Deposited 2011-06-14 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 37–55(19 aa) Fragment:SEE REMARK 999
Mutation:D380Y, LP(linker 2) Non-standard monomer:Yes (specific site not provided by mmCIF) CA CALCIUM ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.2 M sodium chloride, 0.1 M Tris, pH 8.5, 25% PEG3350, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Resolution 2.40 Å R-free 0.213
3SG5 Crystal Structure of Dimeric GCaMP3-D380Y, QP(linker 1), LP(linker 2) Deposited 2011-06-14 Assembly 1 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 37–55(19 aa) Fragment:SEE REMARK 999
Mutation:D380Y, QP(linker 1), LP(linker 2) Non-standard monomer:Yes (specific site not provided by mmCIF) CA CALCIUM ION × 8 SO4 SULFATE ION × 8 GOL GLYCEROL × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;0.1 M Bis-Tris, pH 6.5, 2 M ammonium sulfate, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Resolution 1.90 Å R-free 0.226
3SG6 Crystal Structure of Dimeric GCaMP2-LIA(linker 1) Deposited 2011-06-14 Assembly 1 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 37–55(19 aa) Fragment:SEE REMARK 999
Mutation:LIA(linker 1) Non-standard monomer:Yes (specific site not provided by mmCIF) CA CALCIUM ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.2 M lithium sulfate, 0.1 M Tris, pH 8.5, 30% PEG4000, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Resolution 1.70 Å R-free 0.249
3SG7 Crystal Structure of GCaMP3-KF(linker 1) Deposited 2011-06-14 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 37–55(19 aa) Fragment:SEE REMARK 999
Mutation:KF(linker 1) Non-standard monomer:Yes (specific site not provided by mmCIF) CA CALCIUM ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.2 M ammonium sulfate, 0.1 M Tris, pH 8.5, 25% PEG3350, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Resolution 1.90 Å R-free 0.230
3WLC Crystal structure of dimeric GCaMP6m Deposited 2013-11-08 Assembly 1 Insufficient information Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 37–55(19 aa) Fragment:UNP RESIDUES 37-55, 149-238, 2-144, 3-149
Mutation:M153K, V163A, S175G, D180Y, T203V, A206K, H231L, F64L, V93I, N61D, D79Y, M77G, K78S, T80R, S82T, R91G Non-standard monomer:Yes (specific site not provided by mmCIF) CA CALCIUM ION × 8 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 8;293 K;0.1M HEPES, 20% w/v PEG 3350, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 2.49 Å R-free 0.225
3WLD Crystal structure of monomeric GCaMP6m Deposited 2013-11-08 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 37–55(19 aa) Fragment:UNP RESIDUES 37-55, 149-238, 2-144, 3-149
Mutation:M153K, V163A, S175G, D180Y, T203V, A206K, H231L, F64L, V93I, N61D, D79Y, M77G, K78S, T80R, S82T, R91G Non-standard monomer:Yes (specific site not provided by mmCIF) CA CALCIUM ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7.4;293 K;0.1M HEPES, 18% w/v PEG 3350, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 2.70 Å R-free 0.212
4I2Y Crystal Structure of the genetically encoded calcium indicator RGECO1 Deposited 2012-11-23 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 37–55(19 aa)
Mutation:;Q44N, T46A, T62S, L65M, R68E, V71A, G74S, H77K, A79G, K81R, L89A, V90A, F92V, S94T, I95T, M97K, Y107A, Y109I, S112I, T117V, Y129C, T132A, R174H, T178S, G197A, H198F, N199Q, V201A, V228A, V230I, K240F, K249R, V261I, V262I, T263H, T265N, C274V, F281L, I282R, V284T, S288P, N363D, I366F, K380N, S404G, N414D, E430V ; Non-standard monomer:Yes (specific site not provided by mmCIF) CA CALCIUM ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 5;277 K;73mM malonic acid, 10mM ammonium citrate tribasic, 5mM succinic acid, 12mM malic acid, 16mM sodium acetate trihydrate, 20mM sodium formate, 6mM ammonium tartrate dibasic, 12% PEG 3350, pH 5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Resolution 2.20 Å R-free 0.257
4I2Y Crystal Structure of the genetically encoded calcium indicator RGECO1 Deposited 2012-11-23 Assembly 2 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain B 37–55(19 aa)
Mutation:;Q44N, T46A, T62S, L65M, R68E, V71A, G74S, H77K, A79G, K81R, L89A, V90A, F92V, S94T, I95T, M97K, Y107A, Y109I, S112I, T117V, Y129C, T132A, R174H, T178S, G197A, H198F, N199Q, V201A, V228A, V230I, K240F, K249R, V261I, V262I, T263H, T265N, C274V, F281L, I282R, V284T, S288P, N363D, I366F, K380N, S404G, N414D, E430V ; Non-standard monomer:Yes (specific site not provided by mmCIF) CA CALCIUM ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 5;277 K;73mM malonic acid, 10mM ammonium citrate tribasic, 5mM succinic acid, 12mM malic acid, 16mM sodium acetate trihydrate, 20mM sodium formate, 6mM ammonium tartrate dibasic, 12% PEG 3350, pH 5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Resolution 2.20 Å R-free 0.257
4OY4 calcium-free CaMPARI v0.2 Deposited 2014-02-10 Assembly 1 Insufficient information Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 37–55(19 aa)
Non-standard monomer:Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 2 GOL GLYCEROL × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP;pH 7.5;277.15 K;0.2 M Ammonium sulfate, 0.1 M HEPES pH 7.5, 25% w/v Polyethylene glycol 3,350, 10 mM EGTA
Resolution 2.03 Å R-free 0.235