当前蛋白身份:Q6SW67 重新检索
本组结构的主要差异维度
组装状态不同 配体/离子不同 实验方法不同 实验环境不同 结构质量指标不同

差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。

相关结构差异明细

一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。

PDB 条目 Assembly / 聚集状态 构建体 突变与修饰 配体、离子与非聚合物 实验方法 实验环境 结构质量
5VOB Crystal structure of HCMV Pentamer in complex with neutralizing antibody 8I21 提交 2017-05-02 Assembly 1 其他组合 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致
链 A 1–715(715 aa)
未记录 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 10 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 8.2;293 K;10% (wt/vol) PEG400 10% isopropanol 2% (wt/vol) benzamidine 0.1M Tris pH 8.2
分辨率 3.02 Å R-free 0.237
5VOC Crystal structure of HCMV Pentamer in complex with neutralizing antibody 8I21 - Low resolution dataset for initial phasing by SAD 提交 2017-05-02 Assembly 1 其他组合 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致
链 A 1–715(715 aa)
未记录 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 5 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 8.2;293 K;10% (wt/vol) PEG400 10% isopropanol 2% (wt/vol) benzamidine 0.1M Tris pH 8.2
分辨率 3.99 Å R-free 0.276
5VOD Crystal structure of HCMV Pentamer in complex with neutralizing antibody 9I6 提交 2017-05-02 Assembly 1 其他组合 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致
链 A 1–715(715 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 6.2;293 K;10% (wt/vol) PEG methyl ether 500 0.1 M MES pH 6.2 0.00001 M phenol
分辨率 5.90 Å R-free 0.299
5VOD Crystal structure of HCMV Pentamer in complex with neutralizing antibody 9I6 提交 2017-05-02 Assembly 2 其他组合 异源复合物;蛋白 × 14 PDB 声明:tetradecameric(14) 与蛋白数一致
链 A 1–715(715 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 6.2;293 K;10% (wt/vol) PEG methyl ether 500 0.1 M MES pH 6.2 0.00001 M phenol
分辨率 5.90 Å R-free 0.299
7LBE CryoEM structure of the HCMV Trimer gHgLgO in complex with neutralizing fabs 13H11 and MSL-109 提交 2021-01-07 Assembly 1 其他组合 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致
链 A 1–715(715 aa)
未记录 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 16 MAN alpha-D-mannopyranose × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.5;The sample was gently cross-linked with 0.025% (v/v) EM-grade glutaraldehyde for 10 min at RT and quenched with 9 mM Tris pH 7.5
cryo-EM玻璃化条件 冷冻剂 ETHANE;blot for 2.5 seconds before plunging
分辨率 2.90 Å
7LBF CryoEM structure of the HCMV Trimer gHgLgO in complex with human Platelet-derived growth factor receptor alpha and neutralizing fabs 13H11 and MSL-109 提交 2021-01-07 Assembly 1 其他组合 异源复合物;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致
链 A 1–715(715 aa)
未记录 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 18 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.5;The sample was gently cross-linked with 0.025% (v/v) EM-grade glutaraldehyde for 10 min at RT and quenched with 9 mM Tris pH 7.5
cryo-EM玻璃化条件 冷冻剂 ETHANE;blot for 2.5 seconds before plunging
分辨率 2.80 Å
7LBG CryoEM structure of the HCMV Trimer gHgLgO in complex with human Transforming growth factor beta receptor type 3 and neutralizing fabs 13H11 and MSL-109 提交 2021-01-07 Assembly 1 其他组合 异源复合物;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致
链 A 1–715(715 aa)
未记录 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 17 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.5
cryo-EM玻璃化条件 冷冻剂 ETHANE;blot for 3.5 seconds before plunging
分辨率 2.60 Å