当前蛋白身份:Q6SW67
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差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。
相关结构差异明细
一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。
| PDB 条目 | Assembly / 聚集状态 | 构建体 | 突变与修饰 | 配体、离子与非聚合物 | 实验方法 | 实验环境 | 结构质量 |
|---|---|---|---|---|---|---|---|
| 5VOB Crystal structure of HCMV Pentamer in complex with neutralizing antibody 8I21 提交 2017-05-02 | Assembly 1 其他组合 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致 |
链 A
1–715(715 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 10 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.2;293 K;10% (wt/vol) PEG400
10% isopropanol
2% (wt/vol) benzamidine
0.1M Tris pH 8.2
|
分辨率 3.02 Å R-free 0.237 |
| 5VOC Crystal structure of HCMV Pentamer in complex with neutralizing antibody 8I21 - Low resolution dataset for initial phasing by SAD 提交 2017-05-02 | Assembly 1 其他组合 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致 |
链 A
1–715(715 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 5 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.2;293 K;10% (wt/vol) PEG400
10% isopropanol
2% (wt/vol) benzamidine
0.1M Tris pH 8.2
|
分辨率 3.99 Å R-free 0.276 |
| 5VOD Crystal structure of HCMV Pentamer in complex with neutralizing antibody 9I6 提交 2017-05-02 | Assembly 1 其他组合 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致 |
链 A
1–715(715 aa)
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.2;293 K;10% (wt/vol) PEG methyl ether 500
0.1 M MES pH 6.2
0.00001 M phenol
|
分辨率 5.90 Å R-free 0.299 |
| 5VOD Crystal structure of HCMV Pentamer in complex with neutralizing antibody 9I6 提交 2017-05-02 | Assembly 2 其他组合 异源复合物;蛋白 × 14 PDB 声明:tetradecameric(14) 与蛋白数一致 |
链 A
1–715(715 aa)
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6.2;293 K;10% (wt/vol) PEG methyl ether 500
0.1 M MES pH 6.2
0.00001 M phenol
|
分辨率 5.90 Å R-free 0.299 |
| 7LBE CryoEM structure of the HCMV Trimer gHgLgO in complex with neutralizing fabs 13H11 and MSL-109 提交 2021-01-07 | Assembly 1 其他组合 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致 |
链 A
1–715(715 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 16 MAN alpha-D-mannopyranose × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;The sample was gently cross-linked with 0.025% (v/v) EM-grade glutaraldehyde for 10 min at RT and quenched with 9 mM Tris pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE;blot for 2.5 seconds before plunging
|
分辨率 2.90 Å |
| 7LBF CryoEM structure of the HCMV Trimer gHgLgO in complex with human Platelet-derived growth factor receptor alpha and neutralizing fabs 13H11 and MSL-109 提交 2021-01-07 | Assembly 1 其他组合 异源复合物;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致 |
链 A
1–715(715 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 18 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;The sample was gently cross-linked with 0.025% (v/v) EM-grade glutaraldehyde for 10 min at RT and quenched with 9 mM Tris pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE;blot for 2.5 seconds before plunging
|
分辨率 2.80 Å |
| 7LBG CryoEM structure of the HCMV Trimer gHgLgO in complex with human Transforming growth factor beta receptor type 3 and neutralizing fabs 13H11 and MSL-109 提交 2021-01-07 | Assembly 1 其他组合 异源复合物;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致 |
链 A
1–715(715 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 17 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
冷冻剂 ETHANE;blot for 3.5 seconds before plunging
|
分辨率 2.60 Å |