← Back to search

Protein Structures and Oligomeric States

Enter a protein name, UniProt accession or PDB ID. Name searches ask you to confirm the protein identity before related structures are queried.

Current Protein Identity：Q7VTV0 New Search
5PDB entries
5Biological assembly
9chain/assembly records
Main Difference Dimensions in This Set
Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
9O90 Crystal structure of UTP--glucose-1-phosphate uridylyltransferase from Bordetella pertussis Deposited 2025-04-17 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 26–302（277 aa）
Chain B 26–302（277 aa）
Not recorded GLY GLYCINE × 4 GOL GLYCEROL × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7.5；291 K；Morpheus H5: 20% PEG 550 MME, 10% PEG 20K, 0.1M HEPES/MOPS, pH 7.5, 20mM each of DL-Alanine, Glycine, DL-Lysine, DL-Serine, DL-Glutamic acid. BopeA.00118.a.B2.PW39372 at 25.3 mg/mL. plate 19783 H5 drop 1, Puck: PSL-1103, Cryo: direct.
Resolution 1.93 Å R-free 0.215
9YFB Crystal Structure UTP--glucose-1-phosphate uridylyltransferase from Bordetella pertussis in complex with UTP Deposited 2025-09-25 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 26–302（277 aa） Fragment：26-302
Not recorded MG MAGNESIUM ION × 4 UTP URIDINE 5'-TRIPHOSPHATE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6.5；291 K；Berkeley B9: 100mM Bis-Tris/HCL pH 6.5, 200mM Magnesium chloride, 25% PEG 3550. BopeA.00118.a.B2.PW39372 at 25.3 mg/mL. 2mM UTP + 2mM MgCl2 added to protein prior to crystallization. plate 19925 B9 drop 1, Puck: PSL-0706, Cryo: 80% crystallant + 20% glycerol
Resolution 1.82 Å R-free 0.232
9YFI Crystal Structure UTP--glucose-1-phosphate uridylyltransferase from Bordetella pertussis in complex with URIDINE-5'-DIPHOSPHATE-GLUCOSE Deposited 2025-09-26 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 26–302（277 aa）
Chain B 26–302（277 aa）
Not recorded SO4 SULFATE ION × 2 MG MAGNESIUM ION × 1 UPG URIDINE-5'-DIPHOSPHATE-GLUCOSE × 2 GOL GLYCEROL × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；291 K；Berkeley B5: 200mM Lithium Sulfate, 20% PEG 3350. BopeA.00118.a.B2.PW39372 at 25.3 mg/mL. 2mM URIDINE-5'-DIPHOSPHATE-GLUCOSE (UPG) + 2mM MgCl2 added to protein prior to crystallization. plate 19925 B5 drop 2, Puck: PSL-0708, Cryo: 80% crystallant + 20% glycerol
Resolution 1.80 Å R-free 0.199
9YFK Crystal Structure UTP--glucose-1-phosphate uridylyltransferase from Bordetella pertussis in complex with URIDINE-5'-DIPHOSPHATE-GLUCOSE (twinned lattice) Deposited 2025-09-26 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 26–302（277 aa） Fragment：26-302
Chain B 26–302（277 aa） Fragment：26-302
Not recorded UPG URIDINE-5'-DIPHOSPHATE-GLUCOSE × 2 MG MAGNESIUM ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 8.5；291 K；Berkeley B1: 30% PEG 3350, 400 mM NaCl, 100 mM Tris, pH 8.5. BopeA.00118.a.B2.PW39372 at 25.3 mg/mL. 2mM UTP, 2mM D-glucose-1-phosphate and 2mM MgCl2 added to protein prior to crystallization. The product URIDINE-5'-DIPHOSPHATE-GLUCOSE (UPG) was bound. plate 19925 B1 drop 3, Puck: PSL-0713, Cryo: 80% crystallant + 20% glycerol
Resolution 1.68 Å R-free 0.204
9YGK Crystal Structure UTP--glucose-1-phosphate uridylyltransferase from Bordetella pertussis (sulfate bound) Deposited 2025-09-29 Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count
Chain A 26–302（277 aa） Fragment：26-302
Chain B 26–302（277 aa） Fragment：26-302
Not recorded SO4 SULFATE ION × 19 CL CHLORIDE ION × 3 GOL GLYCEROL × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7；291 K；Index B6: 0.1M HEPES pH 7.0, 1.4M Sodium citrate tribasic dihydrate. BopeA.00118.a.B2.PW39372 at 25.3 mg/mL. plate 19780 B6 drop 1, Puck: PSL-1201, Cryo: 2.5M Lithium Sulfate
Resolution 1.95 Å R-free 0.223

This page presents structural evidence recorded in PDB/mmCIF.“No recorded non-water small molecule” does not prove that the experimental sample was ligand-free; experimental conditions belong to the PDB experiment, while ligands and copy counts are shown for each biological assembly.