Current Protein Identity:Q91132
New Search
Difference tags compare only the current result set; every original PDB and assembly record remains separate.
Related-Structure Differences
Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.
| PDB Entry | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Experimental Method | Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 3FRP Crystal Structure of Cobra Venom Factor, a Co-factor for C3- and C5 convertase CVFBb Deposited 2009-01-08 | Assembly 1 Protein homooligomer Homooligomer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count |
Chain A
23–649(627 aa)
Chain B
1264–1642(379 aa)
Chain G
733–984(252 aa)
|
Not recorded | CA CALCIUM ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.8;293 K;13% PEG 3350, 10 mM MES pH 6.8, 5 mM CaCl2, 200 mM NH4Cl, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
Resolution 2.61 Å R-free 0.297 |
| 3HRZ Cobra Venom Factor (CVF) in complex with human factor B Deposited 2009-06-10 | Assembly 1 Other combination Heteromer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count |
Chain A
23–649(627 aa)
Fragment:residues 23-649
Chain B
733–984(252 aa)
Fragment:residues 733-984
Chain C
1264–1642(379 aa)
Fragment:residues 1264-1642
|
Not recorded | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 MG MAGNESIUM ION × 2 K POTASSIUM ION × 1 P6G HEXAETHYLENE GLYCOL × 2 PO4 PHOSPHATE ION × 5 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;291 K;PEG 3350, PEG 400, Na/K Phosphate, Bis-Tris propane, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K
|
Resolution 2.20 Å R-free 0.226 |
| 3HS0 Cobra Venom Factor (CVF) in complex with human factor B Deposited 2009-06-10 | Assembly 1 Other combination Heteromer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count |
Chain F
23–649(627 aa)
Fragment:residues 23-649
Chain G
733–984(252 aa)
Fragment:residues 733-984
Chain H
1264–1642(379 aa)
Fragment:residues 1264-1642
|
Not recorded | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 MG MAGNESIUM ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 9;291 K;PEG 1500, 2,3 butanediol, malic acid 2-(N-morpholino)ethanesulfonic acid tris (hydroxymethyl)aminomethane buffer (MMT), pH 9.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K
|
Resolution 3.00 Å R-free 0.243 |
| 3HS0 Cobra Venom Factor (CVF) in complex with human factor B Deposited 2009-06-10 | Assembly 2 Other combination Heteromer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count |
Chain A
23–649(627 aa)
Fragment:residues 23-649
Chain B
733–984(252 aa)
Fragment:residues 733-984
Chain C
1264–1642(379 aa)
Fragment:residues 1264-1642
|
Not recorded | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4 MG MAGNESIUM ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 9;291 K;PEG 1500, 2,3 butanediol, malic acid 2-(N-morpholino)ethanesulfonic acid tris (hydroxymethyl)aminomethane buffer (MMT), pH 9.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K
|
Resolution 3.00 Å R-free 0.243 |
| 3HS0 Cobra Venom Factor (CVF) in complex with human factor B Deposited 2009-06-10 | Assembly 3 Other combination Heteromer;Protein × 8 PDB declaration: octameric(8) Consistent with protein count |
Chain A
23–649(627 aa)
Fragment:residues 23-649
Chain B
733–984(252 aa)
Fragment:residues 733-984
Chain C
1264–1642(379 aa)
Fragment:residues 1264-1642
Chain F
23–649(627 aa)
Fragment:residues 23-649
Chain G
733–984(252 aa)
Fragment:residues 733-984
Chain H
1264–1642(379 aa)
Fragment:residues 1264-1642
|
Not recorded | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 7 MG MAGNESIUM ION × 4 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 9;291 K;PEG 1500, 2,3 butanediol, malic acid 2-(N-morpholino)ethanesulfonic acid tris (hydroxymethyl)aminomethane buffer (MMT), pH 9.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K
|
Resolution 3.00 Å R-free 0.243 |
| 3PRX Structure of Complement C5 in Complex with CVF and SSL7 Deposited 2010-11-30 | Assembly 1 Other combination Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count |
Chain B
1–1642(1642 aa)
|
Not recorded | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION;pH 7.4;292 K;3 M sodium malonate, pH 7.4, VAPOR DIFFUSION, temperature 292K
|
Resolution 4.30 Å R-free 0.261 |
| 3PRX Structure of Complement C5 in Complex with CVF and SSL7 Deposited 2010-11-30 | Assembly 2 Other combination Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count |
Chain D
1–1642(1642 aa)
|
Not recorded | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION;pH 7.4;292 K;3 M sodium malonate, pH 7.4, VAPOR DIFFUSION, temperature 292K
|
Resolution 4.30 Å R-free 0.261 |
| 3PVM Structure of Complement C5 in Complex with CVF Deposited 2010-12-07 | Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain B
1–1642(1642 aa)
|
Not recorded | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 | X-RAY DIFFRACTION | mmCIF provides none of the parsed conditions | Resolution 4.30 Å R-free 0.262 |
| 3PVM Structure of Complement C5 in Complex with CVF Deposited 2010-12-07 | Assembly 2 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain D
1–1642(1642 aa)
|
Not recorded | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 | X-RAY DIFFRACTION | mmCIF provides none of the parsed conditions | Resolution 4.30 Å R-free 0.262 |
| 8AYH Structure of Complement C5 in Complex with small molecule inhibitor and CVF Deposited 2022-09-02 | Assembly 1 Protein heterocomplex Heteromer;Protein × 3 PDB declaration: trimeric(3) Consistent with protein count |
Chain B
1–1642(1642 aa)
|
Not recorded | H1H 5-methoxy-2-[[(1~{S})-1-(2-methoxyphenyl)ethyl]carbamoylamino]-4-(4-methylpentoxy)benzoic acid × 1 MG MAGNESIUM ION × 1 | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.5;50mM HEPES pH 7.5
100mM NaCl
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.35 Å |