Current Protein Identity：Q9BVA6
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Difference tags compare only the current result set; every original PDB and assembly record remains separate.
Related-Structure Differences
Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.
| PDB Entry | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Experimental Method | Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 4U04 Structure of a eukaryotic fic domain containing protein Deposited 2014-07-11 | Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: Dimeric（2） Consistent with protein count |
Chain A
102–445（344 aa）
Fragment：UNP residues 102-445
Chain B
102–445（344 aa）
Fragment：UNP residues 102-445
|
Not recorded | TAR D(-)-TARTARIC ACID × 1 PG4 TETRAETHYLENE GLYCOL × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.5；289 K；20% PEG 3350, 200mM Na K Tartrate, 100mM Bis-Tris Propane 7.5
|
Resolution 2.48 Å R-free 0.245 |
| 4U07 ATP bound to eukaryotic FIC domain containing protein Deposited 2014-07-11 | Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: Dimeric（2） Consistent with protein count |
Chain A
102–445（344 aa）
Fragment：UNP residues 102-445
Chain B
102–445（344 aa）
Fragment：UNP residues 102-445
|
Not recorded | MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 PG4 TETRAETHYLENE GLYCOL × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.5；292 K；20% peg 3350, 200mM Na K tartrate, 100mM Bist-Tris Propane 7.5
|
Resolution 2.64 Å R-free 0.258 |
| 4U0S Structure of Eukaryotic fic domain containing protein with ADP Deposited 2014-07-14 | Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: Dimeric（2） Consistent with protein count |
Chain A
102–445（344 aa）
Chain B
102–445（344 aa）
|
Mutation：E234G Mutation：E234G | ADP ADENOSINE-5'-DIPHOSPHATE × 2 MG MAGNESIUM ION × 2 PG4 TETRAETHYLENE GLYCOL × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.5；292 K；20% peg 3350, 200mM Na K tartrate, 100mM Bis-Tris-Propane 7.5
|
Resolution 2.49 Å R-free 0.245 |
| 4U0U Wild type eukaryotic fic domain containing protein with ADP Deposited 2014-07-14 | Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: Dimeric（2） Consistent with protein count |
Chain A
102–445（344 aa）
Fragment：UNP residues 102-445
Chain B
102–445（344 aa）
Fragment：UNP residues 102-445
|
Not recorded | PG4 TETRAETHYLENE GLYCOL × 3 ADP ADENOSINE-5'-DIPHOSPHATE × 2 MG MAGNESIUM ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；292 K；20% PEG 3350, 200mM Na K tartrate, 100mM Bis-Tris-Propane 7.5
|
Resolution 2.98 Å R-free 0.256 |
| 4U0Z Eukaryotic Fic Domain containing protein with bound APCPP Deposited 2014-07-14 | Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: Dimeric（2） Consistent with protein count |
Chain A
102–445（344 aa）
Fragment：UNP residues 102-445
Chain G
102–445（344 aa）
Fragment：UNP residues 102-445
|
Not recorded | APC DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER × 2 MG MAGNESIUM ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.5；292 K；25% PEG 3350, 200mM Na K Tartrate, 100mM Bis-Tris Propane 7.5
|
Resolution 2.95 Å R-free 0.251 |
| 4U0Z Eukaryotic Fic Domain containing protein with bound APCPP Deposited 2014-07-14 | Assembly 2 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: Dimeric（2） Consistent with protein count |
Chain A
102–445（344 aa）
Fragment：UNP residues 102-445
Chain G
102–445（344 aa）
Fragment：UNP residues 102-445
|
Not recorded | APC DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER × 2 MG MAGNESIUM ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.5；292 K；25% PEG 3350, 200mM Na K Tartrate, 100mM Bis-Tris Propane 7.5
|
Resolution 2.95 Å R-free 0.251 |
| 4U0Z Eukaryotic Fic Domain containing protein with bound APCPP Deposited 2014-07-14 | Assembly 3 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: Dimeric（2） Consistent with protein count |
Chain B
102–445（344 aa）
Fragment：UNP residues 102-445
Chain H
102–445（344 aa）
Fragment：UNP residues 102-445
|
Not recorded | APC DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER × 2 MG MAGNESIUM ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.5；292 K；25% PEG 3350, 200mM Na K Tartrate, 100mM Bis-Tris Propane 7.5
|
Resolution 2.95 Å R-free 0.251 |
| 4U0Z Eukaryotic Fic Domain containing protein with bound APCPP Deposited 2014-07-14 | Assembly 4 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: Dimeric（2） Consistent with protein count |
Chain C
102–445（344 aa）
Fragment：UNP residues 102-445
Chain E
102–445（344 aa）
Fragment：UNP residues 102-445
|
Not recorded | APC DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER × 2 MG MAGNESIUM ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.5；292 K；25% PEG 3350, 200mM Na K Tartrate, 100mM Bis-Tris Propane 7.5
|
Resolution 2.95 Å R-free 0.251 |
| 4U0Z Eukaryotic Fic Domain containing protein with bound APCPP Deposited 2014-07-14 | Assembly 5 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: Dimeric（2） Consistent with protein count |
Chain C
102–445（344 aa）
Fragment：UNP residues 102-445
Chain E
102–445（344 aa）
Fragment：UNP residues 102-445
|
Not recorded | APC DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER × 2 MG MAGNESIUM ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.5；292 K；25% PEG 3350, 200mM Na K Tartrate, 100mM Bis-Tris Propane 7.5
|
Resolution 2.95 Å R-free 0.251 |
| 4U0Z Eukaryotic Fic Domain containing protein with bound APCPP Deposited 2014-07-14 | Assembly 6 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: Dimeric（2） Consistent with protein count |
Chain D
102–445（344 aa）
Fragment：UNP residues 102-445
Chain F
102–445（344 aa）
Fragment：UNP residues 102-445
|
Not recorded | APC DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER × 2 MG MAGNESIUM ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.5；292 K；25% PEG 3350, 200mM Na K Tartrate, 100mM Bis-Tris Propane 7.5
|
Resolution 2.95 Å R-free 0.251 |
| 4U0Z Eukaryotic Fic Domain containing protein with bound APCPP Deposited 2014-07-14 | Assembly 7 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: Dimeric（2） Consistent with protein count |
Chain D
102–445（344 aa）
Fragment：UNP residues 102-445
Chain F
102–445（344 aa）
Fragment：UNP residues 102-445
|
Not recorded | APC DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER × 2 MG MAGNESIUM ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.5；292 K；25% PEG 3350, 200mM Na K Tartrate, 100mM Bis-Tris Propane 7.5
|
Resolution 2.95 Å R-free 0.251 |
| 6I7G Crystal structure of dimeric wild type FICD complexed with ATP Deposited 2018-11-16 | Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
104–445（342 aa）
Chain B
104–445（342 aa）
|
Not recorded | ATP ADENOSINE-5'-TRIPHOSPHATE × 2 PEG DI(HYDROXYETHYL)ETHER × 1 1PE PENTAETHYLENE GLYCOL × 2 PG4 TETRAETHYLENE GLYCOL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 7.5；293 K；0.1 M Tris pH 7.5; 20% PEG 300; 5% PEG8K; 10% Glycerol
|
Resolution 2.70 Å R-free 0.319 |
| 6I7H Crystal structure of dimeric FICD mutant K256S Deposited 2018-11-16 | Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
104–445（342 aa）
|
Mutation：K256S | MG MAGNESIUM ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8.5；293 K；0.1 M Tris pH 8.5; 0.05 M Magnesium Chloride; 40% Ethanol
|
Resolution 2.25 Å R-free 0.259 |
| 6I7I Crystal structure of dimeric FICD mutant K256A complexed with MgATP Deposited 2018-11-16 | Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
104–445（342 aa）
|
Mutation：K256A | MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；0.1 M Bis-Tris pH 6.5; 0.2 M Magnesium Chloride; 25% PEG3350
|
Resolution 2.33 Å R-free 0.325 |
| 6I7J Crystal structure of monomeric FICD mutant L258D Deposited 2018-11-16 | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
104–445（342 aa）
|
Mutation：L258D | SO4 SULFATE ION × 7 1PE PENTAETHYLENE GLYCOL × 3 PG4 TETRAETHYLENE GLYCOL × 5 PEG DI(HYDROXYETHYL)ETHER × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8.5；293 K；0.1 M Tris pH 8.5; 2.0 M Ammonium Sulphate
|
Resolution 2.65 Å R-free 0.283 |
| 6I7K Crystal structure of monomeric FICD mutant L258D complexed with MgATP Deposited 2018-11-16 | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
104–445（342 aa）
|
Mutation：L258D | MG MAGNESIUM ION × 1 ATP ADENOSINE-5'-TRIPHOSPHATE × 1 EOH ETHANOL × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；1.0 M Sodium Chloride; 10% Ethanol
|
Resolution 2.54 Å R-free 0.252 |
| 6I7L Crystal structure of monomeric FICD mutant L258D complexed with MgAMP-PNP Deposited 2018-11-16 | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
104–445（342 aa）
|
Mutation：L258D | ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1 MG MAGNESIUM ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；293 K；1.5 M Sodium Chloride; 10% Ethanol
|
Resolution 2.32 Å R-free 0.251 |
| 6ZMD Crystal structure of HYPE covalently tethered to BiP bound to AMP-PNP Deposited 2020-07-02 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain B
102–445（344 aa）
|
Mutation：T168A, T183A, E234G, L258D, E404C | ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1 QMK ~{N}-[2-[1-[(2~{R},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-[[tris(oxidanyl)-$l^{5}-phosphanyl]oxymethyl]oxolan-2-yl]-1,2,3-triazol-4-yl]ethyl]ethanamide × 1 MG MAGNESIUM ION × 2 PO4 PHOSPHATE ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；292 K；0.2 M NaCl, 0.1 M Na/K phosphate pH 6.2 and 10% (w/v) PEG 8000
|
Resolution 2.64 Å R-free 0.235 |
| 7B7Z DeAMPylation complex of monomeric FICD and AMPylated BiP (state 1) Deposited 2020-12-12 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
104–445（342 aa）
|
Mutation：L258D, H363A | AMP ADENOSINE MONOPHOSPHATE × 1 MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1 MG MAGNESIUM ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 6.5；298 K；0.1 M MES pH 6.5
10% PEG 4000
0.2 M NaCl
|
Resolution 1.70 Å R-free 0.221 |
| 7B80 DeAMPylation complex of monomeric FICD and AMPylated BiP (state 2) Deposited 2020-12-12 | Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
104–445（342 aa）
|
Not recorded | AMP ADENOSINE MONOPHOSPHATE × 1 MG MAGNESIUM ION × 2 PO4 PHOSPHATE ION × 1 K POTASSIUM ION × 3 P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL × 2 PEG DI(HYDROXYETHYL)ETHER × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP；pH 8；298 K；0.1 M Tris pH 8.0
25% PEG 400
|
Resolution 1.87 Å R-free 0.228 |
| 9YZ5 human FicD bound with farnesyl pyrophosphate Deposited 2025-10-30 | Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric（2） Consistent with protein count |
Chain A
105–433（329 aa）
Chain B
105–433（329 aa）
|
Not recorded | FPP FARNESYL DIPHOSPHATE × 2 MG MAGNESIUM ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；289 K；100 mM Bis-Tris propane (pH 7.5), 200 mM potassium sodium tartrate, and 21% PEG 3350
|
Resolution 2.58 Å R-free 0.290 |