当前蛋白身份:Q9FIP9
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差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。
相关结构差异明细
一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。
| PDB 条目 | Assembly / 聚集状态 | 构建体 | 突变与修饰 | 配体、离子与非聚合物 | 实验方法 | 实验环境 | 结构质量 |
|---|---|---|---|---|---|---|---|
| 4RQW Crystal structure of Myc3 N-terminal JAZ-binding domain [44-238] from Arabidopsis 提交 2014-11-05 | Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 A
44–238(195 aa)
片段:Myc3 N-terminal JAZ-binding domain (UNP residues 44-238)
|
非标准单体:是(mmCIF未提供具体位点) | CA CALCIUM ION × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;25% (w/v) polyethylene glycol 3350, 0.2 M NaCl, 0.1 M Bis-Tris, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.20 Å R-free 0.263 |
| 4RQW Crystal structure of Myc3 N-terminal JAZ-binding domain [44-238] from Arabidopsis 提交 2014-11-05 | Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 B
44–238(195 aa)
片段:Myc3 N-terminal JAZ-binding domain (UNP residues 44-238)
|
非标准单体:是(mmCIF未提供具体位点) | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;25% (w/v) polyethylene glycol 3350, 0.2 M NaCl, 0.1 M Bis-Tris, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.20 Å R-free 0.263 |
| 4RQW Crystal structure of Myc3 N-terminal JAZ-binding domain [44-238] from Arabidopsis 提交 2014-11-05 | Assembly 3 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
44–238(195 aa)
片段:Myc3 N-terminal JAZ-binding domain (UNP residues 44-238)
链 B
44–238(195 aa)
片段:Myc3 N-terminal JAZ-binding domain (UNP residues 44-238)
|
非标准单体:是(mmCIF未提供具体位点) 非标准单体:是(mmCIF未提供具体位点) | CA CALCIUM ION × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;25% (w/v) polyethylene glycol 3350, 0.2 M NaCl, 0.1 M Bis-Tris, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.20 Å R-free 0.263 |
| 4RRU Myc3 N-terminal JAZ-binding domain[5-242] from arabidopsis 提交 2014-11-06 | Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 A
5–242(238 aa)
片段:Myc3 N-terminal JAZ-binding domain (UNP residues 5-242)
|
未记录 | CA CALCIUM ION × 2 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.2 M magnesium chloride, 0.1 M Tris, pH 8.5, 30% (w/v) polyethylene glycol 4000, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.10 Å R-free 0.276 |
| 4RRU Myc3 N-terminal JAZ-binding domain[5-242] from arabidopsis 提交 2014-11-06 | Assembly 2 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
5–242(238 aa)
片段:Myc3 N-terminal JAZ-binding domain (UNP residues 5-242)
|
未记录 | CA CALCIUM ION × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.2 M magnesium chloride, 0.1 M Tris, pH 8.5, 30% (w/v) polyethylene glycol 4000, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 2.10 Å R-free 0.276 |
| 4RS9 Structure of Myc3 N-terminal JAZ-binding domain [44-238] in complex with Jas motif of JAZ9 提交 2014-11-07 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
44–238(195 aa)
片段:N-terminal JAZ-binding domain (UNP residues 44-238)
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.2 M magnesium chloride, 0.1 M Tris, pH 8.5, and 30% (w/v) polyethylene glycol 4000, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
分辨率 1.95 Å R-free 0.234 |
| 4YWC Crystal structure of Myc3(5-242) fragment in complex with Jaz9(218-239) peptide 提交 2015-03-20 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
5–242(238 aa)
片段:N-terminal domain (UNP residues 5-242)
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.9;293 K;The purified proteins at a concentration of 15 mg/ml are mixed with 0.2 M magnesium nitrate, 20% (w/v) polyethylene glycol 3,350. Crystals of about 100 um in length appeared in 3 days
|
分辨率 2.40 Å R-free 0.295 |
| 4YWC Crystal structure of Myc3(5-242) fragment in complex with Jaz9(218-239) peptide 提交 2015-03-20 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 B
5–242(238 aa)
片段:N-terminal domain (UNP residues 5-242)
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 5.9;293 K;The purified proteins at a concentration of 15 mg/ml are mixed with 0.2 M magnesium nitrate, 20% (w/v) polyethylene glycol 3,350. Crystals of about 100 um in length appeared in 3 days
|
分辨率 2.40 Å R-free 0.295 |
| 4YZ6 Crystal Structure of Myc3[44-238] from Arabidopsis in complex with Jaz1 peptide [200-221] 提交 2015-03-24 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
44–238(195 aa)
片段:UNP residues 44-238
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7;293 K;The MYC3(44-238)-JAZ1 complex crystals were grown at 20 degree in sitting drops containing 0.2 ul of the purified complex proteins at a concentration of 15 mg/ml and 0.2 ul of well solution containing 3.5 M sodium formate. Crystals of about 80 um in length appeared in 2 days
|
分辨率 1.95 Å R-free 0.217 |
| 5T0F Crystal structure of the Myc3 N-terminal domain [44-242] in complex with JAZ10 CMID domain [16-58] from arabidopsis 提交 2016-08-16 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
44–242(199 aa)
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 6;293 K;0.1 M Tris, pH 6.0, 20% (w/v) polyethylene glycol monomethyl ether 2,000
|
分辨率 2.40 Å R-free 0.270 |
| 5T0Q Crystal structure of the Myc3 N-terminal domain [44-242] in complex with JAZ10 Jas domain [166-192] from arabidopsis 提交 2016-08-16 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
44–242(199 aa)
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;pH 7;293 K;20% w/v polyethylene glycol 3,350, 0.2 M magnesium formate dihydrate, pH 7.0.
|
分辨率 2.15 Å R-free 0.242 |
| 7FDM Crystal structure of transcription factor MYB29 in complex with MYC3 提交 2021-07-17 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 A
44–238(195 aa)
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;291 K;0.1 M HEPES pH 7.0, 20% (w/v) PEG 6000, 0.2 M Sodium chloride
|
分辨率 2.50 Å R-free 0.268 |
| 7FDM Crystal structure of transcription factor MYB29 in complex with MYC3 提交 2021-07-17 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 B
44–238(195 aa)
|
未记录 | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;291 K;0.1 M HEPES pH 7.0, 20% (w/v) PEG 6000, 0.2 M Sodium chloride
|
分辨率 2.50 Å R-free 0.268 |
| 8T2I Negative stain EM assembly of MYC, JAZ, and NINJA complex 提交 2023-06-06 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 A
49–238(190 aa)
|
未记录 | 未记录非水小分子 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.8
|
分辨率 10.40 Å |