当前蛋白身份:Q9GZX7 重新检索
本组结构的主要差异维度
构建体不同 突变/修饰不同 组装状态不同 配体/离子不同 实验环境不同 结构质量指标不同

差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。

相关结构差异明细

一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。

PDB 条目 Assembly / 聚集状态 构建体 突变与修饰 配体、离子与非聚合物 实验方法 实验环境 结构质量
5JJ4 Crystal Structure of a Variant Human Activation-induced Deoxycytidine Deaminase as an MBP fusion protein 提交 2016-04-22 Assembly 1 信息不足 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 C 23–183(161 aa) 片段:unp residues 27-384, unp residues 3-183
未记录 ZN ZINC ION × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;277 K;100mM MES pH 6.5, 200mM Calcium Acetate, 15%PEG8000
分辨率 2.81 Å R-free 0.232
5JJ4 Crystal Structure of a Variant Human Activation-induced Deoxycytidine Deaminase as an MBP fusion protein 提交 2016-04-22 Assembly 2 信息不足 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 23–183(161 aa) 片段:unp residues 27-384, unp residues 3-183
未记录 ZN ZINC ION × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;277 K;100mM MES pH 6.5, 200mM Calcium Acetate, 15%PEG8000
分辨率 2.81 Å R-free 0.232
5JJ4 Crystal Structure of a Variant Human Activation-induced Deoxycytidine Deaminase as an MBP fusion protein 提交 2016-04-22 Assembly 3 信息不足 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 B 23–183(161 aa) 片段:unp residues 27-384, unp residues 3-183
未记录 ZN ZINC ION × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;277 K;100mM MES pH 6.5, 200mM Calcium Acetate, 15%PEG8000
分辨率 2.81 Å R-free 0.232
5W0R Crystal structure of MBP fused activation-induced cytidine deaminase (AID) in complex with cacodylic acid 提交 2017-05-31 Assembly 1 信息不足 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 B 13–181(169 aa) 片段:UNP P0AEY0 residues 27-392, UNP Q9GZX7 residues 13-181
未记录 ZN ZINC ION × 1 CAC CACODYLATE ION × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5.5;289 K;0.05 M sodium cacodylate at pH 5.5, 20 mM MgCl2, 10 mM CaCl2, 10 mM spermidine, 5% PEG3350
分辨率 2.40 Å R-free 0.239
5W0R Crystal structure of MBP fused activation-induced cytidine deaminase (AID) in complex with cacodylic acid 提交 2017-05-31 Assembly 2 信息不足 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 13–181(169 aa) 片段:UNP P0AEY0 residues 27-392, UNP Q9GZX7 residues 13-181
未记录 ZN ZINC ION × 1 CAC CACODYLATE ION × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5.5;289 K;0.05 M sodium cacodylate at pH 5.5, 20 mM MgCl2, 10 mM CaCl2, 10 mM spermidine, 5% PEG3350
分辨率 2.40 Å R-free 0.239
5W0U Crystal structure of MBP fused activation-induced cytidine deaminase (AID) in complex with dCMP 提交 2017-05-31 Assembly 1 信息不足 单体;蛋白 × 1 PDB 声明:trimeric(3) 与全部聚合物一致
链 B 13–181(169 aa) 片段:UNP residues 27-392,UNP residues 13-181
未记录 ZN ZINC ION × 1 DCM 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE × 1 CA CALCIUM ION × 1 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.2;289 K;0.1 M MES at pH 6.2, 3%PEG3350, 10 mM CaCl2, 20mM dCMP
分辨率 2.90 Å R-free 0.281
5W0U Crystal structure of MBP fused activation-induced cytidine deaminase (AID) in complex with dCMP 提交 2017-05-31 Assembly 2 信息不足 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 13–181(169 aa) 片段:UNP residues 27-392,UNP residues 13-181
未记录 ZN ZINC ION × 1 DCM 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.2;289 K;0.1 M MES at pH 6.2, 3%PEG3350, 10 mM CaCl2, 20mM dCMP
分辨率 2.90 Å R-free 0.281
5W0Z Crystal structure of MBP fused activation-induced cytidine deaminase (AID) 提交 2017-06-01 Assembly 1 信息不足 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 13–181(169 aa) 片段:UNP P0AEY0 residues 27-392,UNP Q9GZX7 residues 13-181
未记录 ZN ZINC ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;298 K;0.26 M NaCl, 0.1 M MES pH 6.0, 12% PEG3350
分辨率 3.61 Å R-free 0.307
5W0Z Crystal structure of MBP fused activation-induced cytidine deaminase (AID) 提交 2017-06-01 Assembly 2 信息不足 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 B 13–181(169 aa) 片段:UNP P0AEY0 residues 27-392,UNP Q9GZX7 residues 13-181
未记录 ZN ZINC ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;298 K;0.26 M NaCl, 0.1 M MES pH 6.0, 12% PEG3350
分辨率 3.61 Å R-free 0.307
5W1C Crystal structure of MBP fused activation-induced cytidine deaminase (AID) in complex with cytidine 提交 2017-06-02 Assembly 1 信息不足 同源多聚体;蛋白 × 2 PDB 声明:tetrameric(4) 与全部聚合物一致
链 A 5–181(177 aa)
链 B 5–181(177 aa)
未记录 ZN ZINC ION × 2 CTN 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE × 2 CA CALCIUM ION × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.2;289 K;0.1 M MES at pH 6.2, 3% PEG3350, 10 mM CaCl2 and 20mM Cytidine
分辨率 3.18 Å R-free 0.270