Current Protein Identity:Q9UNZ2 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
1SS6 Solution structure of SEP domain from human p47 Deposited 2004-03-23 Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count
Chain A 171–270(100 aa) Fragment:SEP domain
Not recorded No recorded non-water small molecule SOLUTION NMR
NMR measurement conditions pH 5.6;300 K;Ionic strength (raw mmCIF value) 20mM phosphate buffer NA, 150mM sodium chloride;Pressure ambient
NMR measurement conditions pH 5.6;300 K;Ionic strength (raw mmCIF value) 20mM phosphate buffer NA, 150mM sodium chloride;Pressure ambient
NMR measurement conditions pH 5.6;300 K;Ionic strength (raw mmCIF value) 20mM phosphate buffer NA, 150mM sodium chloride;Pressure ambient
NMR sample composition 2mM SEP domain U-15N;20mM phosphate buffer NA; 150mM sodium chloride; 90% H2O, 10% D2O | 90% H2O/10% D2O
NMR sample composition 1mM SEP domain U-15N,13C;20mM phosphate buffer NA; 150mM sodium chloride; 90% H2O, 10% D2O | 90% H2O/10% D2O
NMR sample composition 1mM SEP domain U-15N,13C;20mM phosphate buffer NA; 150mM sodium chloride; 100% D2O | 100% D2O
Resolution not provided
8HRZ Crystal structure of the p97-N/D1 hexamer in complex with six p47-UBX domains Deposited 2022-12-16 Assembly 1 Protein heterocomplex Heteromer;Protein × 24 PDB declaration: 24-meric(24) Consistent with protein count
Chain M 287–370(84 aa)
Chain N 287–370(84 aa)
Chain O 287–370(84 aa)
Chain P 287–370(84 aa)
Chain Q 287–370(84 aa)
Chain R 287–370(84 aa)
Chain S 287–370(84 aa)
Chain T 287–370(84 aa)
Chain U 287–370(84 aa)
Chain V 287–370(84 aa)
Chain W 287–370(84 aa)
Chain X 287–370(84 aa)
Not recorded ADP ADENOSINE-5'-DIPHOSPHATE × 12 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP;pH 7;295 K;14% PEG 3350, 0.2M ammonium citrate tribasic (pH 7), 0.01M hexamine cobalt (III) chloride
Resolution 2.70 Å R-free 0.256
9MPU Cryo-EM structure of p47 bound to VCP N-domain (with D1 domain) Deposited 2024-12-31 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 1–370(370 aa)
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 4.00 Å