Current Protein Identity:Q9UNZ2
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Difference tags compare only the current result set; every original PDB and assembly record remains separate.
Related-Structure Differences
Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.
| PDB Entry | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Experimental Method | Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 1SS6 Solution structure of SEP domain from human p47 Deposited 2004-03-23 | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count |
Chain A
171–270(100 aa)
Fragment:SEP domain
|
Not recorded | No recorded non-water small molecule | SOLUTION NMR |
NMR measurement conditions
pH 5.6;300 K;Ionic strength (raw mmCIF value) 20mM phosphate buffer NA, 150mM sodium chloride;Pressure ambient
NMR measurement conditions
pH 5.6;300 K;Ionic strength (raw mmCIF value) 20mM phosphate buffer NA, 150mM sodium chloride;Pressure ambient
NMR measurement conditions
pH 5.6;300 K;Ionic strength (raw mmCIF value) 20mM phosphate buffer NA, 150mM sodium chloride;Pressure ambient
NMR sample composition
2mM SEP domain U-15N;20mM phosphate buffer NA; 150mM sodium chloride; 90% H2O, 10% D2O | 90% H2O/10% D2O
NMR sample composition
1mM SEP domain U-15N,13C;20mM phosphate buffer NA; 150mM sodium chloride; 90% H2O, 10% D2O | 90% H2O/10% D2O
NMR sample composition
1mM SEP domain U-15N,13C;20mM phosphate buffer NA; 150mM sodium chloride; 100% D2O | 100% D2O
|
Resolution not provided |
| 8HRZ Crystal structure of the p97-N/D1 hexamer in complex with six p47-UBX domains Deposited 2022-12-16 | Assembly 1 Protein heterocomplex Heteromer;Protein × 24 PDB declaration: 24-meric(24) Consistent with protein count |
Chain M
287–370(84 aa)
Chain N
287–370(84 aa)
Chain O
287–370(84 aa)
Chain P
287–370(84 aa)
Chain Q
287–370(84 aa)
Chain R
287–370(84 aa)
Chain S
287–370(84 aa)
Chain T
287–370(84 aa)
Chain U
287–370(84 aa)
Chain V
287–370(84 aa)
Chain W
287–370(84 aa)
Chain X
287–370(84 aa)
|
Not recorded | ADP ADENOSINE-5'-DIPHOSPHATE × 12 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;295 K;14% PEG 3350, 0.2M ammonium citrate tribasic (pH 7), 0.01M hexamine cobalt (III) chloride
|
Resolution 2.70 Å R-free 0.256 |
| 9MPU Cryo-EM structure of p47 bound to VCP N-domain (with D1 domain) Deposited 2024-12-31 | Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain B
1–370(370 aa)
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.00 Å |