Current Protein Identity:Q9UPP1 New Search
Main Difference Dimensions in This Set
Different construct Different mutation/modification Different assembly state Different ligand/ion Different experimental conditions Different structure-quality metrics

Difference tags compare only the current result set; every original PDB and assembly record remains separate.

Related-Structure Differences

Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.

PDB Entry Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Experimental Method Experimental Conditions Structure Quality
2WWU Crystal structure of the catalytic domain of PHD finger protein 8 Deposited 2009-10-29 Assembly 1 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 115–483(369 aa) Fragment:CATALYTIC DOMAIN, RESIDUES 115-483
Not recorded SO4 SULFATE ION × 14 ACT ACETATE ION × 10 NI NICKEL (II) ION × 2 BGC beta-D-glucopyranose × 4 X-RAY DIFFRACTION
X-ray crystallization conditions 1.5 M (NH4)2SO4, 0.1 M SODIUM ACETATE PH 4.25
Resolution 2.15 Å R-free 0.211
3KV4 Structure of PHF8 in complex with histone H3 Deposited 2009-11-29 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 37–483(447 aa) Fragment:UNP Residues 37-483
Not recorded ZN ZINC ION × 2 FE2 FE (II) ION × 1 NI NICKEL (II) ION × 1 EDO 1,2-ETHANEDIOL × 13 OGA N-OXALYLGLYCINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 5.6;25% (v/v) polyethylene glycol 3350, 0.2 M NaCl, and 0.1 M NaCitrate pH 5.6, VAPOR DIFFUSION, HANGING DROP
Resolution 2.19 Å R-free 0.255
4DO0 Crystal Structure of human PHF8 in complex with Daminozide Deposited 2012-02-09 Assembly 1 Protein homooligomer Homooligomer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain A 115–483(369 aa)
Not recorded DZA DAMINOZIDE × 2 ZN ZINC ION × 2 SO4 SULFATE ION × 12 EDO 1,2-ETHANEDIOL × 6 ACT ACETATE ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION;pH 4.5;277 K;0.1M acetate, 2M ammonium sulfate, pH 4.5, VAPOR DIFFUSION, temperature 277K
Resolution 2.55 Å R-free 0.265
7CMZ Crystal Structure of BRCT7/8 in Complex with the APS Motif of PHF8 Deposited 2020-07-29 Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count
Chain B 842–863(22 aa)
Not recorded K POTASSIUM ION × 1 NA SODIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION;289 K;Sodium phosphate monobasic monohydrate, Potassium phosphate dibasic
Resolution 1.70 Å R-free 0.215