查看完整 summary.json 原文
{
"code": "SASDA68",
"status": "Published",
"type_of_curve": "Single concentration",
"angular_unit": "1/nm",
"project": {
"title": "Accuracy of molecular mass determination of proteins in solution by small-angle X-ray scattering",
"publication": {
"title": "Accuracy of molecular mass determination of proteins in solution by small-angle X-ray scattering",
"author_list": "Mylonas E, Svergun D",
"journal": "Journal of Applied Crystallography",
"doi": "10.1107/S002188980700252X",
"pmid": null,
"published_date": "2007 Feb 17"
},
"status": "released",
"submitted_date": "2015-07-06",
"released_date": "2015-07-07"
},
"pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDA68.out",
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDA68.dat",
"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDA68_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDA68_kratky_img.png",
"pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDA68_pofr_img.png",
"intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDA68_guinier_img.png",
"sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDA68.sascif",
"experiment": {
"instrument": {
"detector": {
"type": null,
"name": "MAR 345 Image Plate",
"resolution": null
},
"name": "DORIS III, DESY",
"city": "Hamburg",
"country": "Germany",
"beamline_name": "EMBL X33",
"beam_geometry": null,
"type_of_source": "X-ray synchrotron",
"point_source": null,
"line_collimation": null,
"sample_path_length": null,
"line_collimation_slitlength": null,
"line_collimation_integrationwidth": null,
"xray_energy": null,
"beam_profile_ah": null,
"beam_profile_al": null
},
"sample": {
"molecule": [
{
"long_name": "Fructose-bisphosphate aldolase A",
"short_name": null,
"sequence": "MPHSHPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY",
"organism": "Oryctolagus cuniculus",
"uniprot_code": "P00883",
"uniprot_range_first": 2,
"uniprot_range_last": 364,
"oligomerization": "tetramer",
"molecular_type": "protein",
"uniprot_sequence": "MPHSHPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYR\nQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTN\nGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQ\nNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHAC\nTQKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTF\nSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFIS\nNHAY",
"mw": 39.342,
"total_mw": 157.37,
"number_molecules": 4,
"complex_state": false,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": null
}
],
"buffer": {
"name": "100 mM Tris/HCl 100 mM NaCl",
"concentration_unit": "mM",
"comment": null,
"additive": "100 mM NaCl",
"concentration": 100.0,
"pka": null,
"ph": 7.5,
"deuteration": null
},
"purity_method": null,
"name": "Aldolase in Tris/HCl",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": "EMBL-Hamburg",
"address": "Notkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany",
"full_name": "European Molecular Biology Laboratory (EMBL) - Hamburg outstation",
"webpage": "http://www.embl-hamburg.de/index.php"
},
{
"short_name": "FORTH",
"address": "Heraklion, Greece",
"full_name": "Foundation for Research and Technology-Hellas",
"webpage": "http://www.forth.gr/index.php?l=e"
}
],
"contributor_name": "Efstratios",
"contributor_surname": "Mylonas",
"orcid": null
}
],
"concentration_method": null,
"concentration_unit": "mg/ml",
"date": "2006-05-19",
"storage_temperature": null,
"cell_temperature": 20.0,
"exposure_time": 15.0,
"number_of_frames": 8,
"wavelength": null,
"sample_detector_distance": null,
"concentration_min": null,
"concentration_max": 4.9,
"sample_volume": null,
"flow_rate": null,
"s_min": 0.081,
"s_max": 4.956,
"total_exposure_time": null,
"seccolumn": null
},
"fits": [
{
"models": [
{
"model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDA68_fit1_model1_img.png",
"software": "PDB (Protein Data Bank)",
"pdb_link": [
{
"pdb_code": "1zah",
"ext_code": "1ZAH",
"ext_type": "pdb",
"difference_with_model": "identical"
}
],
"model_title": null,
"type_of_model": "atomic",
"software_version": "",
"model_data": "https://www.sasbdb.org/media/pdb_file/SASDA68_fit1_model1.pdb",
"model_mw": 156.9,
"bead_radius": 1.9,
"log": null,
"symmetry": "",
"comment": "",
"user": 61
}
],
"fit_unit": "1/A",
"fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDA68_fit1_fixed_fit_img.png",
"software": "CRYSOL",
"chi_square_value": 5.396329,
"p_value": 0.0,
"fit_residual_plot": "SASDA68_fit1_fitresiduals_img.png",
"fit_data": "https://www.sasbdb.org/media/fitting_files/SASDA68_fit1.fit",
"fit_log": null,
"software_version": "",
"description": null
}
],
"estimated_volume_method": null,
"pddf_software": "ATSAS GNOM",
"pddf_software_version": null,
"i0_calibration_standard": null,
"description": null,
"experiment_description": null,
"tags": [
"benchmark",
"X33"
],
"intensity_unit": null,
"experimental_mw": 155.0,
"experimental_mw_error": null,
"guinier_i0_mw": 155.0,
"guinier_i0_mw_error": null,
"porod_mw": null,
"porod_mw_error": null,
"pddf_i0": 382.0,
"pddf_i0_error": null,
"guinier_i0": 389.27,
"guinier_i0_error": null,
"pddf_rg": 3.55,
"pddf_rg_error": null,
"guinier_rg": 3.64,
"guinier_rg_error": null,
"pddf_dmax": 10.5,
"pddf_dmax_error": null,
"porod_volume": null,
"porod_volume_error": null,
"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 58,
"guinier_point_last": 116,
"pddf_point_first": null,
"pddf_point_last": null,
"i0_calibration_standard_data": null,
"intensities_log_log_plot": "SASDA68_datloglog_img.png",
"symmetry": null,
"last_modified": "2023-05-25T11:22:16.556436+02:00",
"bragg_peak": []
}查看完整 manifest.json 原文
{
"code": "SASDA68",
"status": "success",
"started_at": "2026-08-11T16:38:08.882173+00:00",
"finished_at": "2026-08-11T16:38:25.505915+00:00",
"source_last_modified": "2023-05-25T11:22:16.556436+02:00",
"files": [
{
"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDA68/",
"path": "/data/saxsdb/sasbdb/entries/68/sasda68/source/summary.json",
"size": 7498,
"sha256": "991c9a91c3ea4681fca4701fd86727ba20d4b0d71b865c53e9314659a5d5ff9e"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/intensities_files/SASDA68.dat",
"path": "/data/saxsdb/sasbdb/entries/68/sasda68/source/SASDA68.dat",
"size": 95462,
"sha256": "9966c22191d955f510498f02f43abb505336637e335b6453cf7c2f766e7ad742",
"role": "curve"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/p_of_R_files/SASDA68.out",
"path": "/data/saxsdb/sasbdb/entries/68/sasda68/source/SASDA68.out",
"size": 41483,
"sha256": "0cda3e41985f291b86fa25530357c5ddd945b75648983f6ae9f9e509c5577294",
"role": "pddf"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDA68.sascif",
"path": "/data/saxsdb/sasbdb/entries/68/sasda68/source/SASDA68.sascif",
"size": 1374419,
"sha256": "1ac89dacfa0f9d3a093339b110fa54f954ee9e2c4faec1fe5c971df6ea3a15ea",
"role": "sascif"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/zip_directories/SASDA68.zip",
"path": "/data/saxsdb/sasbdb/entries/68/sasda68/source/SASDA68.zip",
"size": 298105,
"sha256": "3647cd4ba3b866bc751c5a0a23ea3dfb193b44b6e29b6a409eb0e4d41f3c8138",
"role": "full_entry_zip",
"zip_member_count": 4,
"zip_validation": "central_directory_readable"
}
]
}
