The following content comes directly from the SASBDB entry. Missing values are shown as “—”; SAXSdb does not infer undeclared units.
Every source field is expanded here, including empty values, list members and fields already shown above.
View the complete summary.json source
{
"code": "SASDAH4",
"status": "Published",
"type_of_curve": "Merged",
"angular_unit": "1/nm",
"project": {
"title": "The solution structure and dynamics of the DH-PH module of PDZRhoGEF in isolation and in complex with nucleotide-free RhoA.",
"publication": {
"title": "The solution structure and dynamics of the DH-PH module of PDZRhoGEF in isolation and in complex with nucleotide-free RhoA.",
"author_list": "Cierpicki T, Bielnicki J, Zheng M, Gruszczyk J, Kasterka M, Petoukhov M, Zhang A, Fernandez EJ, Svergun DI, Derewenda U, Bushweller JH, Derewenda ZS",
"journal": "Protein Sci",
"doi": "10.1002/pro.219",
"pmid": "19670212",
"published_date": "2009 Oct"
},
"status": "released",
"submitted_date": null,
"released_date": "2015-07-07"
},
"pddf_data": "https://www.sasbdb.org/media/p_of_R_files/SASDAH4.out",
"intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDAH4.dat",
"intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDAH4_dat_img.png",
"intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDAH4_kratky_img.png",
"pddf_plot": "https://www.sasbdb.org/media/p_of_R_files/pofr_images/SASDAH4_pofr_img.png",
"intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDAH4_guinier_img.png",
"sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDAH4.sascif",
"experiment": {
"instrument": {
"detector": {
"type": null,
"name": "MAR 345 Image Plate",
"resolution": null
},
"name": "DORIS III, DESY",
"city": "Hamburg",
"country": "Germany",
"beamline_name": "EMBL X33",
"beam_geometry": null,
"type_of_source": "X-ray synchrotron",
"point_source": null,
"line_collimation": null,
"sample_path_length": null,
"line_collimation_slitlength": null,
"line_collimation_integrationwidth": null,
"xray_energy": null,
"beam_profile_ah": null,
"beam_profile_al": null
},
"sample": {
"molecule": [
{
"long_name": "DH-PH module of PDZRhoGEF",
"short_name": "DH-PH",
"sequence": "QNWQHTVGKDVVAGLTQREIDRQEVINELFVTEASHLRTLRVLDLIFYQRMKKENLMPREELARLFPNLPELIEIHNSWC\r\nEAMKKLREEGPIIKEISDLMLARFDGPAREELQQVAAQFCSYQSIALELIKTKQRKESRFQLFMQEAESHPQCRRLQLRD\r\nLIISEMQRLTKYPLLLESIIKHTEGGTSEHEKLCRARDQCREILKYVNEAVKQTENRHRLEGYQKRLDATALERASNPLA\r\nAEFKSLDLTTRKMIHEGPLTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCTFSPVLKLNAVLIRSVATDKRAFFII\r\nCTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNA\r\n",
"organism": "Homo sapiens",
"uniprot_code": null,
"uniprot_range_first": null,
"uniprot_range_last": null,
"oligomerization": "monomer",
"molecular_type": "protein",
"uniprot_sequence": null,
"mw": 41.0,
"total_mw": 41.0,
"number_molecules": 1,
"complex_state": null,
"deuteration": null,
"molecule_source": "biological",
"molecule_description": null
}
],
"buffer": {
"name": "50 mM Tris-HCL 150 mM NaCl 1.0 mM DTT",
"concentration_unit": null,
"comment": null,
"additive": "150 mM NaCl, 1.0 mM DTT",
"concentration": null,
"pka": null,
"ph": 7.5,
"deuteration": null
},
"purity_method": null,
"name": "DH-PH",
"ext_coefficient": null,
"contrast": null,
"specific_vol": null,
"dry_vol": null,
"absorbption": null,
"deuteration": null,
"mixture": null
},
"contributor": [
{
"affiliation": [
{
"short_name": "EMBL-Hamburg",
"address": "Notkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany",
"full_name": "European Molecular Biology Laboratory (EMBL) - Hamburg outstation",
"webpage": "http://www.embl-hamburg.de/index.php"
}
],
"contributor_name": "Maxim",
"contributor_surname": "Petoukhov",
"orcid": null
}
],
"concentration_method": null,
"concentration_unit": "mg/ml",
"date": "2008-10-30",
"storage_temperature": 10.0,
"cell_temperature": 10.0,
"exposure_time": null,
"number_of_frames": null,
"wavelength": null,
"sample_detector_distance": null,
"concentration_min": 0.86,
"concentration_max": 4.7,
"sample_volume": null,
"flow_rate": null,
"s_min": 0.23,
"s_max": 4.816,
"total_exposure_time": null,
"seccolumn": null
},
"fits": [
{
"models": [
{
"model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDAH4_fit1_model1_img.png",
"software": "DAMMIN",
"pdb_link": [],
"model_title": null,
"type_of_model": "dummy",
"software_version": "",
"model_data": "https://www.sasbdb.org/media/pdb_file/SASDAH4_fit1_model1.pdb",
"model_mw": null,
"bead_radius": 1.9,
"log": null,
"symmetry": "",
"comment": "",
"user": 102
}
],
"fit_unit": "1/A",
"fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDAH4_fit1_fit_img.png",
"software": null,
"chi_square_value": 2.458624,
"p_value": 0.299396,
"fit_residual_plot": "SASDAH4_fit1_fitresiduals_img.png",
"fit_data": "https://www.sasbdb.org/media/fitting_files/SASDAH4_fit1.fir",
"fit_log": null,
"software_version": null,
"description": null
},
{
"models": [
{
"model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDAH4_fit2_model1_img.png",
"software": "CRYSOL",
"pdb_link": [],
"model_title": null,
"type_of_model": "atomic",
"software_version": "",
"model_data": "https://www.sasbdb.org/media/pdb_file/SASDAH4_fit2_model1.pdb",
"model_mw": 41.4,
"bead_radius": 0.0,
"log": null,
"symmetry": "",
"comment": "",
"user": 102
}
],
"fit_unit": "1/A",
"fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDAH4_fit2_fit_img.png",
"software": null,
"chi_square_value": 2.399401,
"p_value": 0.0,
"fit_residual_plot": "fit4columns56_fitresiduals_img.png",
"fit_data": "https://www.sasbdb.org/media/fitting_files/SASDAH4_fit2.fit",
"fit_log": null,
"software_version": null,
"description": null
}
],
"estimated_volume_method": null,
"pddf_software": "ATSAS GNOM",
"pddf_software_version": null,
"i0_calibration_standard": "BSA",
"description": null,
"experiment_description": null,
"tags": [
"X33"
],
"intensity_unit": null,
"experimental_mw": 40.0,
"experimental_mw_error": null,
"guinier_i0_mw": null,
"guinier_i0_mw_error": null,
"porod_mw": null,
"porod_mw_error": null,
"pddf_i0": null,
"pddf_i0_error": null,
"guinier_i0": 0.378,
"guinier_i0_error": null,
"pddf_rg": null,
"pddf_rg_error": null,
"guinier_rg": 2.9,
"guinier_rg_error": null,
"pddf_dmax": 9.0,
"pddf_dmax_error": null,
"porod_volume": 60.0,
"porod_volume_error": null,
"estimated_volume": null,
"estimated_volume_error": null,
"guinier_point_first": 1,
"guinier_point_last": 96,
"pddf_point_first": null,
"pddf_point_last": null,
"i0_calibration_standard_data": "https://www.sasbdb.org/media/standard_curves/bsa_007.dat",
"intensities_log_log_plot": "SASDAH4_datloglog_img.png",
"symmetry": null,
"last_modified": "2023-05-25T11:22:16.556436+02:00",
"bragg_peak": []
}View the complete manifest.json source
{
"code": "SASDAH4",
"status": "success",
"started_at": "2026-08-11T14:23:49.205108+00:00",
"finished_at": "2026-08-11T14:23:58.330572+00:00",
"source_last_modified": "2023-05-25T11:22:16.556436+02:00",
"files": [
{
"status": "downloaded",
"url": "https://www.sasbdb.org/rest-api/entry/summary/SASDAH4/",
"path": "/data/saxsdb/sasbdb/entries/h4/sasdah4/source/summary.json",
"size": 7835,
"sha256": "016d9733783a14448977075b8f6e3d62e633d6896496c701c914c0e2c8d459c9"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/intensities_files/SASDAH4.dat",
"path": "/data/saxsdb/sasbdb/entries/h4/sasdah4/source/SASDAH4.dat",
"size": 89000,
"sha256": "01422258052c01a44e4ee7c20b7e77c60ad43e2c532afcf709e48f31f0f1a2d0",
"role": "curve"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/p_of_R_files/SASDAH4.out",
"path": "/data/saxsdb/sasbdb/entries/h4/sasdah4/source/SASDAH4.out",
"size": 34125,
"sha256": "0e6e53bf61f5e5191809c10ae9d00439e5c3bf9a9697d3966d0b8f8c7bf8417b",
"role": "pddf"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDAH4.sascif",
"path": "/data/saxsdb/sasbdb/entries/h4/sasdah4/source/SASDAH4.sascif",
"size": 704255,
"sha256": "2a44a878f8ea2276d7c556339d0726248166c3ee032cf941bc43ef91a78ea553",
"role": "sascif"
},
{
"status": "downloaded",
"url": "https://www.sasbdb.org/media/zip_directories/SASDAH4.zip",
"path": "/data/saxsdb/sasbdb/entries/h4/sasdah4/source/SASDAH4.zip",
"size": 140564,
"sha256": "59fbefaeac6be46cb88ab9b17af174de7f647c9d7838d5500fc8c627dddd19a2",
"role": "full_entry_zip",
"zip_member_count": 6,
"zip_validation": "central_directory_readable"
}
]
}
