SASDAK4

CRM1 RanGTP

数据类型:SASBDB 实验数据 状态:Published 曲线类型:Single concentration 最后更新:2023-05-25T11:22:08.798758+02:00

1. 样品、组分与实验条件 Sample & Experiment

样品 1 · CRM1 RanGTP

浓度1.0 – 10.0 缓冲液 / pH50 mM Tris-HCL 150 mM NaCl 1.0 mM DTT / 7.5
Experimental temperature10.0 设备 / 束线DORIS III, DESY / EMBL X33
波长— nm曝光120.0 s × 1

分子组分

组分类型 / OrganismUniProt 与Construct寡聚状态Molecular weight
Exportin-1
查看序列
>SP|Q6P5F9|XPO1_MOUSEEXPORTIN-1OS=MUSMUSCULUSGN=XPO1PE=1SV=1MPAIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAWTRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCVEKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFDFSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFETLFTLTMMQLKQMLPLNTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLLEKRLNLREALMEALHYMLLVSEVEETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDIPPRRQLYLTVLSKVRLLMVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTEIIMTKKLQNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLLPNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNVYKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISTPLNPGNPVNNQMFIQDYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLVQIKEFAGEDTSDLFLEERETALRQAQEEKHKLQMSVPGILNPHEIPEEMCD
proteinMus musculusQ6P5F9—–—monomer分子数 1123.09 kDa
GTP-binding nuclear protein Ran
查看序列
>SP|P62826|RAN_HUMANGTP-BINDINGNUCLEARPROTEINRANOS=HOMOSAPIENSGN=RANPE=1SV=3MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
proteinHomo sapiensP62826—–—monomer分子数 124.42 kDa

实验曲线

曲线点数 / 列q range误差质量负强度点来源文件
12032[3]0.1628–4.837 1/nm含误差列缺失 00sasbdb/entries/k4/sasdak4/source/SASDAK4.dat

2. SASBDB 报告的指标 Reported Results

指标方法数值误差单位
dmaxP(r)10.0nm
i0Guinier1.658
mwExperimental140.0kDa
mwPorod140.0kDa
rgGuinier3.61nm
rgP(r)3.6nm

这些数值是 SASBDB 来源记录,不是 SAXSdb 对实验曲线重新计算的结果。

3. 来源拟合与模型 Source Fits & Models

4. 来源文件索引 Source Files

5. 实验说明与论文 Experiment & Publication

6. 完整来源记录 Complete Source Record

下列内容直接来自 SASBDB 条目。字段没有值时显示“—”;Not declared的单位不会由 SAXSdb 猜测。

打开 SASBDB 原始条目

缓冲液与样品属性

缓冲液名称50 mM Tris-HCL 150 mM NaCl 1.0 mM DTT缓冲液浓度
pH7.5添加剂150 mM NaCl, 1.0 mM DTT
缓冲液说明
纯度测定方法消光系数
吸收值散射对比度
比体积 / 干体积— / —混合物 / 氘代— / —

采集条件与仪器

测量日期2009-02-03储存 / 测量温度— / 10.0
曝光时间120.0帧数1
波长样品-探测器距离
光源X-ray synchrotron探测器Pilatus 2M
机构 / 束线DORIS III, DESY / EMBL X33 · Hamburg, Germany
q range0.163 – 4.837样品体积 / 流速— / —

SASBDB 原始图

实验 I(q)
实验 I(q)
实验 I(q) log-log
实验 I(q) log-log
Guinier 图
Guinier 图
Kratky 图
Kratky 图

可Download文件

类别文件状态大小校验值Download与查看
curvesasbdb/entries/k4/sasdak4/source/SASDAK4.datdownloaded91082e0404eb0516e3cfe1c980b40e427a9d23685754793529a4406f5d2a9a3aec95dDownload查看原文件源站
full_entry_zipsasbdb/entries/k4/sasdak4/source/SASDAK4.zipdownloaded1195097fc2057bd1699d273d9f503704f39c1db1ba4e155a36906f41678b2fc213cbccDownload查看原文件源站
pddfsasbdb/entries/k4/sasdak4/source/SASDAK4.outnot_listedDownload查看原文件
sascifsasbdb/entries/k4/sasdak4/source/SASDAK4.sascifdownloaded10537190541d6d98a05f40646f2beb7d4e31ad1e3ec2881ba87cd01fedca10c69a64a1eDownload查看原文件源站
summarysasbdb/entries/k4/sasdak4/source/summary.jsondownloaded11701a48a3ea331dc4f42089f49f12e41ae79a744bd36ea22848e20972c57ab59b0cdDownload查看原文件源站
curve:来源记录
{
  "path": "/data/saxsdb/sasbdb/entries/k4/sasdak4/source/SASDAK4.dat",
  "role": "curve",
  "sha256": "e0404eb0516e3cfe1c980b40e427a9d23685754793529a4406f5d2a9a3aec95d",
  "size": 91082,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/intensities_files/SASDAK4.dat"
}
full_entry_zip:来源记录与 ZIP 内部目录(7 项)
{
  "path": "/data/saxsdb/sasbdb/entries/k4/sasdak4/source/SASDAK4.zip",
  "role": "full_entry_zip",
  "sha256": "7fc2057bd1699d273d9f503704f39c1db1ba4e155a36906f41678b2fc213cbcc",
  "size": 119509,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/zip_directories/SASDAK4.zip",
  "zip_member_count": 7,
  "zip_members": [
    {
      "crc32": "c5e68199",
      "name": "SASDAK4/experimental_data/SASDAK4.dat",
      "size": 91082
    },
    {
      "crc32": "0641c020",
      "name": "SASDAK4/SASDAK4_fit1.fit",
      "size": 9240
    },
    {
      "crc32": "de2296f3",
      "name": "SASDAK4/SASDAK4_fit1_model1.pdb",
      "size": 358434
    },
    {
      "crc32": "045721a8",
      "name": "SASDAK4/SASDAK4_fit2.fit",
      "size": 25185
    },
    {
      "crc32": "1d4f499f",
      "name": "SASDAK4/SASDAK4_fit2_model1.pdb",
      "size": 93847
    },
    {
      "crc32": "553af2ad",
      "name": "SASDAK4/SASDAK4_fit3.fit",
      "size": 25185
    },
    {
      "crc32": "c1750457",
      "name": "SASDAK4/SASDAK4_fit3_model1.pdb",
      "size": 275722
    }
  ],
  "zip_validation": "central_directory_readable"
}
pddf:来源记录
{
  "path": "/data/saxsdb/sasbdb/entries/k4/sasdak4/source/SASDAK4.out",
  "role": "pddf",
  "status": "not_listed"
}
sascif:来源记录
{
  "path": "/data/saxsdb/sasbdb/entries/k4/sasdak4/source/SASDAK4.sascif",
  "role": "sascif",
  "sha256": "0541d6d98a05f40646f2beb7d4e31ad1e3ec2881ba87cd01fedca10c69a64a1e",
  "size": 1053719,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDAK4.sascif"
}
summary:来源记录
{
  "path": "/data/saxsdb/sasbdb/entries/k4/sasdak4/source/summary.json",
  "sha256": "a48a3ea331dc4f42089f49f12e41ae79a744bd36ea22848e20972c57ab59b0cd",
  "size": 11701,
  "status": "downloaded",
  "url": "https://www.sasbdb.org/rest-api/entry/summary/SASDAK4/"
}

全部来源字段(无筛选)

这里自动展开来源记录中的每一个字段,包括空值、列表成员和页面上方已展示过的字段。

summary.json:219 个字段值
字段路径原始值
codeSASDAK4
statusPublished
type_of_curveSingle concentration
angular_unit1/nm
project.titleStructural determinants and mechanism of mammalian CRM1 allostery.
project.publication.titleStructural determinants and mechanism of mammalian CRM1 allostery.
project.publication.author_listDölker N, Blanchet CE, Voß B, Haselbach D, Kappel C, Monecke T, Svergun DI, Stark H, Ficner R, Zachariae U, Grubmüller H, Dickmanns A
project.publication.journalStructure
project.publication.doi10.1016/j.str.2013.05.015
project.publication.pmid23850451
project.publication.published_date2013 Aug 6
project.statusreleased
project.submitted_datenull
project.released_date2015-07-07
pddf_datanull
intensities_datahttps://www.sasbdb.org/media/intensities_files/SASDAK4.dat
intensities_log_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDAK4_dat_img.png
intensities_kratky_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDAK4_kratky_img.png
pddf_plotnull
intensities_guinier_plothttps://www.sasbdb.org/media/intensities_files/scattering_plots/SASDAK4_guinier_img.png
sascif_datahttps://www.sasbdb.org/media/sascif/sascif_files/SASDAK4.sascif
experiment.instrument.detector.typenull
experiment.instrument.detector.namePilatus 2M
experiment.instrument.detector.resolutionnull
experiment.instrument.nameDORIS III, DESY
experiment.instrument.cityHamburg
experiment.instrument.countryGermany
experiment.instrument.beamline_nameEMBL X33
experiment.instrument.beam_geometrynull
experiment.instrument.type_of_sourceX-ray synchrotron
experiment.instrument.point_sourcenull
experiment.instrument.line_collimationnull
experiment.instrument.sample_path_lengthnull
experiment.instrument.line_collimation_slitlengthnull
experiment.instrument.line_collimation_integrationwidthnull
experiment.instrument.xray_energynull
experiment.instrument.beam_profile_ahnull
experiment.instrument.beam_profile_alnull
experiment.sample.molecule[0].long_nameExportin-1
experiment.sample.molecule[0].short_namenull
experiment.sample.molecule[0].sequence>sp|Q6P5F9|XPO1_MOUSE Exportin-1 OS=Mus musculus GN=Xpo1 PE=1 SV=1 MPAIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCV EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY IFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFETLFTLTMMQLKQMLPL NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLLEKRLNLREALMEALHYMLLVSEV EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDIPPRRQLYLTVLSKVRLLM VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTEIIMTKKL QNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL LDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTL LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST PLNPGNPVNNQMFIQDYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV QIKEFAGEDTSDLFLEERETALRQAQEEKHKLQMSVPGILNPHEIPEEMCD
experiment.sample.molecule[0].organismMus musculus
experiment.sample.molecule[0].uniprot_codeQ6P5F9
experiment.sample.molecule[0].uniprot_range_firstnull
experiment.sample.molecule[0].uniprot_range_lastnull
experiment.sample.molecule[0].oligomerizationmonomer
experiment.sample.molecule[0].molecular_typeprotein
experiment.sample.molecule[0].uniprot_sequenceMPAIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCV EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY IFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFETLFTLTMMQLKQMLPL NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLLEKRLNLREALMEALHYMLLVSEV EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDIPPRRQLYLTVLSKVRLLM VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTEIIMTKKL QNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL LDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTL LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST PLNPGNPVNNQMFIQDYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV QIKEFAGEDTSDLFLEERETALRQAQEEKHKLQMSVPGILNPHEIPEEMCD
experiment.sample.molecule[0].mw123.09
experiment.sample.molecule[0].total_mw123.09
experiment.sample.molecule[0].number_molecules1
experiment.sample.molecule[0].complex_statenull
experiment.sample.molecule[0].deuterationnull
experiment.sample.molecule[0].molecule_sourcebiological
experiment.sample.molecule[0].molecule_descriptionnull
experiment.sample.molecule[1].long_nameGTP-binding nuclear protein Ran
experiment.sample.molecule[1].short_namenull
experiment.sample.molecule[1].sequence>sp|P62826|RAN_HUMAN GTP-binding nuclear protein Ran OS=Homo sapiens GN=RAN PE=1 SV=3 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLC GNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMP ALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
experiment.sample.molecule[1].organismHomo sapiens
experiment.sample.molecule[1].uniprot_codeP62826
experiment.sample.molecule[1].uniprot_range_firstnull
experiment.sample.molecule[1].uniprot_range_lastnull
experiment.sample.molecule[1].oligomerizationmonomer
experiment.sample.molecule[1].molecular_typeprotein
experiment.sample.molecule[1].uniprot_sequenceMAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLC GNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMP ALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
experiment.sample.molecule[1].mw24.42
experiment.sample.molecule[1].total_mw24.42
experiment.sample.molecule[1].number_molecules1
experiment.sample.molecule[1].complex_statenull
experiment.sample.molecule[1].deuterationnull
experiment.sample.molecule[1].molecule_sourcebiological
experiment.sample.molecule[1].molecule_descriptionnull
experiment.sample.buffer.name50 mM Tris-HCL 150 mM NaCl 1.0 mM DTT
experiment.sample.buffer.concentration_unitnull
experiment.sample.buffer.commentnull
experiment.sample.buffer.additive150 mM NaCl, 1.0 mM DTT
experiment.sample.buffer.concentrationnull
experiment.sample.buffer.pkanull
experiment.sample.buffer.ph7.5
experiment.sample.buffer.deuterationnull
experiment.sample.purity_methodnull
experiment.sample.nameCRM1 RanGTP
experiment.sample.ext_coefficientnull
experiment.sample.contrastnull
experiment.sample.specific_volnull
experiment.sample.dry_volnull
experiment.sample.absorbptionnull
experiment.sample.deuterationnull
experiment.sample.mixturenull
experiment.contributor[0].affiliation[0].short_nameEMBL-Hamburg
experiment.contributor[0].affiliation[0].addressNotkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany
experiment.contributor[0].affiliation[0].full_nameEuropean Molecular Biology Laboratory (EMBL) - Hamburg outstation
experiment.contributor[0].affiliation[0].webpagehttp://www.embl-hamburg.de/index.php
experiment.contributor[0].contributor_nameClement
experiment.contributor[0].contributor_surnameBlanchet
experiment.contributor[0].orcidnull
experiment.concentration_methodnull
experiment.concentration_unitnull
experiment.date2009-02-03
experiment.storage_temperaturenull
experiment.cell_temperature10.0
experiment.exposure_time120.0
experiment.number_of_frames1
experiment.wavelengthnull
experiment.sample_detector_distancenull
experiment.concentration_min1.0
experiment.concentration_max10.0
experiment.sample_volumenull
experiment.flow_ratenull
experiment.s_min0.163
experiment.s_max4.837
experiment.total_exposure_timenull
experiment.seccolumnnull
fits[0].models[0].model_plothttps://www.sasbdb.org/media/pdb_file/images/SASDAK4_fit1_model1_img.png
fits[0].models[0].softwareDAMMIF
fits[0].models[0].pdb_link[]
fits[0].models[0].model_titlenull
fits[0].models[0].type_of_modeldummy
fits[0].models[0].software_version
fits[0].models[0].model_datahttps://www.sasbdb.org/media/pdb_file/SASDAK4_fit1_model1.pdb
fits[0].models[0].model_mwnull
fits[0].models[0].bead_radius2.2
fits[0].models[0].lognull
fits[0].models[0].symmetry
fits[0].models[0].comment
fits[0].models[0].user43
fits[0].fit_unit1/A
fits[0].fit_plothttps://www.sasbdb.org/media/fitting_files/scattering_plots/SASDAK4_fit1_fit_img.png
fits[0].softwarenull
fits[0].chi_square_valuenull
fits[0].p_value0.0
fits[0].fit_residual_plotfit4columns61_fitresiduals_img.png
fits[0].fit_datahttps://www.sasbdb.org/media/fitting_files/SASDAK4_fit1.fit
fits[0].fit_lognull
fits[0].software_versionnull
fits[0].descriptionnull
fits[1].models[0].model_plothttps://www.sasbdb.org/media/pdb_file/images/SASDAK4_fit2_model1_img.png
fits[1].models[0].softwareMONSA
fits[1].models[0].pdb_link[]
fits[1].models[0].model_titlenull
fits[1].models[0].type_of_modeldummy
fits[1].models[0].software_version
fits[1].models[0].model_datahttps://www.sasbdb.org/media/pdb_file/SASDAK4_fit2_model1.pdb
fits[1].models[0].model_mwnull
fits[1].models[0].bead_radius1.9
fits[1].models[0].loghttps://www.sasbdb.org/media/log_files/CBFicn01.log
fits[1].models[0].symmetry
fits[1].models[0].comment
fits[1].models[0].user43
fits[1].fit_unit1/A
fits[1].fit_plothttps://www.sasbdb.org/media/fitting_files/scattering_plots/SASDAK4_fit2_fit_img.png
fits[1].softwarenull
fits[1].chi_square_value1.515361
fits[1].p_value0.014759
fits[1].fit_residual_plotSASDAK4_fit2_fitresiduals_img.png
fits[1].fit_datahttps://www.sasbdb.org/media/fitting_files/SASDAK4_fit2.fit
fits[1].fit_lognull
fits[1].software_versionnull
fits[1].descriptionnull
fits[2].models[0].model_plothttps://www.sasbdb.org/media/pdb_file/images/SASDAK4_fit3_model1_img.png
fits[2].models[0].softwareMONSA
fits[2].models[0].pdb_link[]
fits[2].models[0].model_titlenull
fits[2].models[0].type_of_modeldummy
fits[2].models[0].software_version
fits[2].models[0].model_datahttps://www.sasbdb.org/media/pdb_file/SASDAK4_fit3_model1.pdb
fits[2].models[0].model_mwnull
fits[2].models[0].bead_radius1.9
fits[2].models[0].loghttps://www.sasbdb.org/media/log_files/CBFicn01_1.log
fits[2].models[0].symmetry
fits[2].models[0].comment
fits[2].models[0].user43
fits[2].fit_unit1/A
fits[2].fit_plothttps://www.sasbdb.org/media/fitting_files/scattering_plots/SASDAK4_fit3_fit_img.png
fits[2].softwarenull
fits[2].chi_square_value1.560001
fits[2].p_value0.058031
fits[2].fit_residual_plotSASDAK4_fit3_fitresiduals_img.png
fits[2].fit_datahttps://www.sasbdb.org/media/fitting_files/SASDAK4_fit3.fit
fits[2].fit_lognull
fits[2].software_versionnull
fits[2].descriptionnull
estimated_volume_methodnull
pddf_softwarenull
pddf_software_versionnull
i0_calibration_standardnull
descriptionnull
experiment_descriptionnull
tags[0]X33
intensity_unitnull
experimental_mw140.0
experimental_mw_errornull
guinier_i0_mwnull
guinier_i0_mw_errornull
porod_mw140.0
porod_mw_errornull
pddf_i0null
pddf_i0_errornull
guinier_i01.658
guinier_i0_errornull
pddf_rg3.6
pddf_rg_errornull
guinier_rg3.61
guinier_rg_errornull
pddf_dmax10.0
pddf_dmax_errornull
porod_volumenull
porod_volume_errornull
estimated_volumenull
estimated_volume_errornull
guinier_point_first26
guinier_point_last87
pddf_point_firstnull
pddf_point_lastnull
i0_calibration_standard_datanull
intensities_log_log_plotSASDAK4_datloglog_img.png
symmetrynull
last_modified2023-05-25T11:22:08.798758+02:00
bragg_peak[]
manifest.json:33 个字段值
字段路径原始值
codeSASDAK4
statussuccess
started_at2026-08-11T14:25:02.105849+00:00
finished_at2026-08-11T14:25:10.234367+00:00
source_last_modified2023-05-25T11:22:08.798758+02:00
files[0].statusdownloaded
files[0].urlhttps://www.sasbdb.org/rest-api/entry/summary/SASDAK4/
files[0].path/data/saxsdb/sasbdb/entries/k4/sasdak4/source/summary.json
files[0].size11701
files[0].sha256a48a3ea331dc4f42089f49f12e41ae79a744bd36ea22848e20972c57ab59b0cd
files[1].statusdownloaded
files[1].urlhttps://www.sasbdb.org/media/intensities_files/SASDAK4.dat
files[1].path/data/saxsdb/sasbdb/entries/k4/sasdak4/source/SASDAK4.dat
files[1].size91082
files[1].sha256e0404eb0516e3cfe1c980b40e427a9d23685754793529a4406f5d2a9a3aec95d
files[1].rolecurve
files[2].rolepddf
files[2].statusnot_listed
files[2].path/data/saxsdb/sasbdb/entries/k4/sasdak4/source/SASDAK4.out
files[3].statusdownloaded
files[3].urlhttps://www.sasbdb.org/media/sascif/sascif_files/SASDAK4.sascif
files[3].path/data/saxsdb/sasbdb/entries/k4/sasdak4/source/SASDAK4.sascif
files[3].size1053719
files[3].sha2560541d6d98a05f40646f2beb7d4e31ad1e3ec2881ba87cd01fedca10c69a64a1e
files[3].rolesascif
files[4].statusdownloaded
files[4].urlhttps://www.sasbdb.org/media/zip_directories/SASDAK4.zip
files[4].path/data/saxsdb/sasbdb/entries/k4/sasdak4/source/SASDAK4.zip
files[4].size119509
files[4].sha2567fc2057bd1699d273d9f503704f39c1db1ba4e155a36906f41678b2fc213cbcc
files[4].rolefull_entry_zip
files[4].zip_member_count7
files[4].zip_validationcentral_directory_readable
查看完整 summary.json 原文
{
  "code": "SASDAK4",
  "status": "Published",
  "type_of_curve": "Single concentration",
  "angular_unit": "1/nm",
  "project": {
    "title": "Structural determinants and mechanism of mammalian CRM1 allostery.",
    "publication": {
      "title": "Structural determinants and mechanism of mammalian CRM1 allostery.",
      "author_list": "Dölker N, Blanchet CE, Voß B, Haselbach D, Kappel C, Monecke T, Svergun DI, Stark H, Ficner R, Zachariae U, Grubmüller H, Dickmanns A",
      "journal": "Structure",
      "doi": "10.1016/j.str.2013.05.015",
      "pmid": "23850451",
      "published_date": "2013 Aug 6"
    },
    "status": "released",
    "submitted_date": null,
    "released_date": "2015-07-07"
  },
  "pddf_data": null,
  "intensities_data": "https://www.sasbdb.org/media/intensities_files/SASDAK4.dat",
  "intensities_log_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDAK4_dat_img.png",
  "intensities_kratky_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDAK4_kratky_img.png",
  "pddf_plot": null,
  "intensities_guinier_plot": "https://www.sasbdb.org/media/intensities_files/scattering_plots/SASDAK4_guinier_img.png",
  "sascif_data": "https://www.sasbdb.org/media/sascif/sascif_files/SASDAK4.sascif",
  "experiment": {
    "instrument": {
      "detector": {
        "type": null,
        "name": "Pilatus 2M",
        "resolution": null
      },
      "name": "DORIS III, DESY",
      "city": "Hamburg",
      "country": "Germany",
      "beamline_name": "EMBL X33",
      "beam_geometry": null,
      "type_of_source": "X-ray synchrotron",
      "point_source": null,
      "line_collimation": null,
      "sample_path_length": null,
      "line_collimation_slitlength": null,
      "line_collimation_integrationwidth": null,
      "xray_energy": null,
      "beam_profile_ah": null,
      "beam_profile_al": null
    },
    "sample": {
      "molecule": [
        {
          "long_name": "Exportin-1",
          "short_name": null,
          "sequence": ">sp|Q6P5F9|XPO1_MOUSE Exportin-1 OS=Mus musculus GN=Xpo1 PE=1 SV=1\nMPAIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW\nTRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCV\nEKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD\nFSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY\nIFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFETLFTLTMMQLKQMLPL\nNTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLLEKRLNLREALMEALHYMLLVSEV\nEETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDIPPRRQLYLTVLSKVRLLM\nVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTEIIMTKKL\nQNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII\nASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV\nQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL\nPNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV\nYKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL\nLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE\nYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTL\nLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST\nPLNPGNPVNNQMFIQDYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV\nQIKEFAGEDTSDLFLEERETALRQAQEEKHKLQMSVPGILNPHEIPEEMCD\n\n",
          "organism": "Mus musculus",
          "uniprot_code": "Q6P5F9",
          "uniprot_range_first": null,
          "uniprot_range_last": null,
          "oligomerization": "monomer",
          "molecular_type": "protein",
          "uniprot_sequence": "MPAIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW\nTRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCV\nEKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD\nFSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY\nIFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFETLFTLTMMQLKQMLPL\nNTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLLEKRLNLREALMEALHYMLLVSEV\nEETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDIPPRRQLYLTVLSKVRLLM\nVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTEIIMTKKL\nQNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII\nASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV\nQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL\nPNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV\nYKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL\nLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE\nYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTL\nLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST\nPLNPGNPVNNQMFIQDYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV\nQIKEFAGEDTSDLFLEERETALRQAQEEKHKLQMSVPGILNPHEIPEEMCD",
          "mw": 123.09,
          "total_mw": 123.09,
          "number_molecules": 1,
          "complex_state": null,
          "deuteration": null,
          "molecule_source": "biological",
          "molecule_description": null
        },
        {
          "long_name": "GTP-binding nuclear protein Ran",
          "short_name": null,
          "sequence": ">sp|P62826|RAN_HUMAN GTP-binding nuclear protein Ran OS=Homo sapiens GN=RAN PE=1 SV=3\nMAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK\nFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLC\nGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMP\nALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL\n\n",
          "organism": "Homo sapiens",
          "uniprot_code": "P62826",
          "uniprot_range_first": null,
          "uniprot_range_last": null,
          "oligomerization": "monomer",
          "molecular_type": "protein",
          "uniprot_sequence": "MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK\nFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLC\nGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMP\nALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL",
          "mw": 24.42,
          "total_mw": 24.42,
          "number_molecules": 1,
          "complex_state": null,
          "deuteration": null,
          "molecule_source": "biological",
          "molecule_description": null
        }
      ],
      "buffer": {
        "name": "50 mM Tris-HCL 150 mM NaCl 1.0 mM DTT",
        "concentration_unit": null,
        "comment": null,
        "additive": "150 mM NaCl, 1.0 mM DTT",
        "concentration": null,
        "pka": null,
        "ph": 7.5,
        "deuteration": null
      },
      "purity_method": null,
      "name": "CRM1 RanGTP",
      "ext_coefficient": null,
      "contrast": null,
      "specific_vol": null,
      "dry_vol": null,
      "absorbption": null,
      "deuteration": null,
      "mixture": null
    },
    "contributor": [
      {
        "affiliation": [
          {
            "short_name": "EMBL-Hamburg",
            "address": "Notkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany",
            "full_name": "European Molecular Biology Laboratory (EMBL) - Hamburg outstation",
            "webpage": "http://www.embl-hamburg.de/index.php"
          }
        ],
        "contributor_name": "Clement",
        "contributor_surname": "Blanchet",
        "orcid": null
      }
    ],
    "concentration_method": null,
    "concentration_unit": null,
    "date": "2009-02-03",
    "storage_temperature": null,
    "cell_temperature": 10.0,
    "exposure_time": 120.0,
    "number_of_frames": 1,
    "wavelength": null,
    "sample_detector_distance": null,
    "concentration_min": 1.0,
    "concentration_max": 10.0,
    "sample_volume": null,
    "flow_rate": null,
    "s_min": 0.163,
    "s_max": 4.837,
    "total_exposure_time": null,
    "seccolumn": null
  },
  "fits": [
    {
      "models": [
        {
          "model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDAK4_fit1_model1_img.png",
          "software": "DAMMIF",
          "pdb_link": [],
          "model_title": null,
          "type_of_model": "dummy",
          "software_version": "",
          "model_data": "https://www.sasbdb.org/media/pdb_file/SASDAK4_fit1_model1.pdb",
          "model_mw": null,
          "bead_radius": 2.2,
          "log": null,
          "symmetry": "",
          "comment": "",
          "user": 43
        }
      ],
      "fit_unit": "1/A",
      "fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDAK4_fit1_fit_img.png",
      "software": null,
      "chi_square_value": null,
      "p_value": 0.0,
      "fit_residual_plot": "fit4columns61_fitresiduals_img.png",
      "fit_data": "https://www.sasbdb.org/media/fitting_files/SASDAK4_fit1.fit",
      "fit_log": null,
      "software_version": null,
      "description": null
    },
    {
      "models": [
        {
          "model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDAK4_fit2_model1_img.png",
          "software": "MONSA",
          "pdb_link": [],
          "model_title": null,
          "type_of_model": "dummy",
          "software_version": "",
          "model_data": "https://www.sasbdb.org/media/pdb_file/SASDAK4_fit2_model1.pdb",
          "model_mw": null,
          "bead_radius": 1.9,
          "log": "https://www.sasbdb.org/media/log_files/CBFicn01.log",
          "symmetry": "",
          "comment": "",
          "user": 43
        }
      ],
      "fit_unit": "1/A",
      "fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDAK4_fit2_fit_img.png",
      "software": null,
      "chi_square_value": 1.515361,
      "p_value": 0.014759,
      "fit_residual_plot": "SASDAK4_fit2_fitresiduals_img.png",
      "fit_data": "https://www.sasbdb.org/media/fitting_files/SASDAK4_fit2.fit",
      "fit_log": null,
      "software_version": null,
      "description": null
    },
    {
      "models": [
        {
          "model_plot": "https://www.sasbdb.org/media/pdb_file/images/SASDAK4_fit3_model1_img.png",
          "software": "MONSA",
          "pdb_link": [],
          "model_title": null,
          "type_of_model": "dummy",
          "software_version": "",
          "model_data": "https://www.sasbdb.org/media/pdb_file/SASDAK4_fit3_model1.pdb",
          "model_mw": null,
          "bead_radius": 1.9,
          "log": "https://www.sasbdb.org/media/log_files/CBFicn01_1.log",
          "symmetry": "",
          "comment": "",
          "user": 43
        }
      ],
      "fit_unit": "1/A",
      "fit_plot": "https://www.sasbdb.org/media/fitting_files/scattering_plots/SASDAK4_fit3_fit_img.png",
      "software": null,
      "chi_square_value": 1.560001,
      "p_value": 0.058031,
      "fit_residual_plot": "SASDAK4_fit3_fitresiduals_img.png",
      "fit_data": "https://www.sasbdb.org/media/fitting_files/SASDAK4_fit3.fit",
      "fit_log": null,
      "software_version": null,
      "description": null
    }
  ],
  "estimated_volume_method": null,
  "pddf_software": null,
  "pddf_software_version": null,
  "i0_calibration_standard": null,
  "description": null,
  "experiment_description": null,
  "tags": [
    "X33"
  ],
  "intensity_unit": null,
  "experimental_mw": 140.0,
  "experimental_mw_error": null,
  "guinier_i0_mw": null,
  "guinier_i0_mw_error": null,
  "porod_mw": 140.0,
  "porod_mw_error": null,
  "pddf_i0": null,
  "pddf_i0_error": null,
  "guinier_i0": 1.658,
  "guinier_i0_error": null,
  "pddf_rg": 3.6,
  "pddf_rg_error": null,
  "guinier_rg": 3.61,
  "guinier_rg_error": null,
  "pddf_dmax": 10.0,
  "pddf_dmax_error": null,
  "porod_volume": null,
  "porod_volume_error": null,
  "estimated_volume": null,
  "estimated_volume_error": null,
  "guinier_point_first": 26,
  "guinier_point_last": 87,
  "pddf_point_first": null,
  "pddf_point_last": null,
  "i0_calibration_standard_data": null,
  "intensities_log_log_plot": "SASDAK4_datloglog_img.png",
  "symmetry": null,
  "last_modified": "2023-05-25T11:22:08.798758+02:00",
  "bragg_peak": []
}
查看完整 manifest.json 原文
{
  "code": "SASDAK4",
  "status": "success",
  "started_at": "2026-08-11T14:25:02.105849+00:00",
  "finished_at": "2026-08-11T14:25:10.234367+00:00",
  "source_last_modified": "2023-05-25T11:22:08.798758+02:00",
  "files": [
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/rest-api/entry/summary/SASDAK4/",
      "path": "/data/saxsdb/sasbdb/entries/k4/sasdak4/source/summary.json",
      "size": 11701,
      "sha256": "a48a3ea331dc4f42089f49f12e41ae79a744bd36ea22848e20972c57ab59b0cd"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/intensities_files/SASDAK4.dat",
      "path": "/data/saxsdb/sasbdb/entries/k4/sasdak4/source/SASDAK4.dat",
      "size": 91082,
      "sha256": "e0404eb0516e3cfe1c980b40e427a9d23685754793529a4406f5d2a9a3aec95d",
      "role": "curve"
    },
    {
      "role": "pddf",
      "status": "not_listed",
      "path": "/data/saxsdb/sasbdb/entries/k4/sasdak4/source/SASDAK4.out"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/sascif/sascif_files/SASDAK4.sascif",
      "path": "/data/saxsdb/sasbdb/entries/k4/sasdak4/source/SASDAK4.sascif",
      "size": 1053719,
      "sha256": "0541d6d98a05f40646f2beb7d4e31ad1e3ec2881ba87cd01fedca10c69a64a1e",
      "role": "sascif"
    },
    {
      "status": "downloaded",
      "url": "https://www.sasbdb.org/media/zip_directories/SASDAK4.zip",
      "path": "/data/saxsdb/sasbdb/entries/k4/sasdak4/source/SASDAK4.zip",
      "size": 119509,
      "sha256": "7fc2057bd1699d273d9f503704f39c1db1ba4e155a36906f41678b2fc213cbcc",
      "role": "full_entry_zip",
      "zip_member_count": 7,
      "zip_validation": "central_directory_readable"
    }
  ]
}